RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CCDC129Q6ZRS4 1044 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 DOCK2Q92608 1830 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 TNS1Q9HBL0 1735 aaKnown RBP22.99■■□□□ 1.27
GMDS-201ENST00000380805 MAST3O60307 1309 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 APBA3O96018 575 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 NIP7Q9Y221 180 aaKnown RBP eCLIP22.99■■□□□ 1.27
GMDS-201ENST00000380805 TAF6LQ9Y6J9 622 aa22.99■■□□□ 1.27
GMDS-201ENST00000380805 SCARF1Q14162 830 aa22.98■■□□□ 1.27
GMDS-201ENST00000380805 FSD2A1L4K1 749 aa22.97■■□□□ 1.27
GMDS-201ENST00000380805 LARGE1O95461 756 aa22.97■■□□□ 1.27
GMDS-201ENST00000380805 KLHL40Q2TBA0 621 aa22.97■■□□□ 1.27
GMDS-201ENST00000380805 WDR33Q9C0J8 1336 aaKnown RBP22.97■■□□□ 1.27
GMDS-201ENST00000380805 CYP21A2P08686 494 aa22.96■■□□□ 1.27
GMDS-201ENST00000380805 ARID4AP29374 1257 aaPredicted RBP22.96■■□□□ 1.27
GMDS-201ENST00000380805 PUM3Q15397 648 aaKnown RBP22.96■■□□□ 1.27
GMDS-201ENST00000380805 CCDC152Q4G0S7 254 aa22.96■■□□□ 1.27
GMDS-201ENST00000380805 LMBRD1Q9NUN5 540 aa22.96■■□□□ 1.27
GMDS-201ENST00000380805 HCLS1P14317 486 aaPredicted RBP22.96■■□□□ 1.27
GMDS-201ENST00000380805 LPIN2Q92539 896 aa22.96■■□□□ 1.27
GMDS-201ENST00000380805 UPF1Q92900 1129 aaKnown RBP eCLIP22.96■■□□□ 1.273e-10■■■■■ 36
GMDS-201ENST00000380805 MCAMP43121 646 aa22.95■■□□□ 1.26
GMDS-201ENST00000380805 ZAP70P43403 619 aa22.95■■□□□ 1.26
GMDS-201ENST00000380805 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
GMDS-201ENST00000380805 ST3GAL1Q11201 340 aa22.95■■□□□ 1.26
GMDS-201ENST00000380805 ME3Q16798 604 aa22.95■■□□□ 1.26
GMDS-201ENST00000380805 ISY1Q9ULR0 285 aaKnown RBP22.95■■□□□ 1.26
GMDS-201ENST00000380805 HSPD1P10809 573 aaKnown RBP22.94■■□□□ 1.26
GMDS-201ENST00000380805 COL9A3Q14050 684 aaPredicted RBP22.94■■□□□ 1.26
GMDS-201ENST00000380805 TOB2Q14106 344 aaPredicted RBP22.94■■□□□ 1.26
GMDS-201ENST00000380805 MCTP1Q6DN14 999 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 NEK1Q96PY6 1258 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 TPCN1Q9ULQ1 816 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 MYO5AQ9Y4I1 1855 aaKnown RBP22.94■■□□□ 1.26
GMDS-201ENST00000380805 UQCRFS1P1P0C7P4 283 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 KCNQ4P56696 695 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 APPBP2Q92624 585 aa22.94■■□□□ 1.26
GMDS-201ENST00000380805 HMGB1P09429 215 aaKnown RBP22.93■■□□□ 1.26
GMDS-201ENST00000380805 TTF1Q15361 905 aaPredicted RBP22.93■■□□□ 1.26
GMDS-201ENST00000380805 DEFB132Q7Z7B7 95 aa22.93■■□□□ 1.26
GMDS-201ENST00000380805 OSBP2Q969R2 916 aa22.93■■□□□ 1.26
GMDS-201ENST00000380805 M0R2C6 588 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 RPS6KA4O75676 772 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 PDIA4P13667 645 aaKnown RBP22.92■■□□□ 1.26
GMDS-201ENST00000380805 EN1Q05925 392 aaPredicted RBP22.92■■□□□ 1.26
GMDS-201ENST00000380805 SLFNL1Q499Z3 407 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 PROM2Q8N271 834 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 SMC3Q9UQE7 1217 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 C4AP0C0L4 1744 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 C4BP0C0L5 1744 aa22.92■■□□□ 1.26
GMDS-201ENST00000380805 PLSCR1O15162 318 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 SF3B2Q13435 895 aaKnown RBP22.91■■□□□ 1.26
GMDS-201ENST00000380805 L1TD1Q5T7N2 865 aaKnown RBP22.91■■□□□ 1.26
GMDS-201ENST00000380805 CCDC102BQ68D86 513 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 COL4A1P02462 1669 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 SF3B3Q15393 1217 aaKnown RBP22.91■■□□□ 1.26
GMDS-201ENST00000380805 ZSCAN25Q6NSZ9 544 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 CCDC83Q8IWF9 413 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 MPHOSPH8Q99549 860 aa22.91■■□□□ 1.26
GMDS-201ENST00000380805 LARP6Q9BRS8 491 aaKnown RBP22.91■■□□□ 1.26
GMDS-201ENST00000380805 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.91■■□□□ 1.26
GMDS-201ENST00000380805 SLC5A1P13866 664 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 SLC10A5Q5PT55 438 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 STOX1Q6ZVD7 989 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 BCL2L12Q9HB09 334 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 SEC31BQ9NQW1 1179 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
GMDS-201ENST00000380805 FOXP2O15409 715 aa22.89■■□□□ 1.26
GMDS-201ENST00000380805 SYT1P21579 422 aa22.89■■□□□ 1.26
GMDS-201ENST00000380805 PI16Q6UXB8 463 aa22.89■■□□□ 1.26
GMDS-201ENST00000380805 CCDC125Q86Z20 511 aa22.89■■□□□ 1.26
GMDS-201ENST00000380805 AGXT2Q9BYV1 514 aa22.89■■□□□ 1.26
GMDS-201ENST00000380805 GZF1Q9H116 711 aaPredicted RBP22.89■■□□□ 1.26
GMDS-201ENST00000380805 STX6O43752 255 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 ADD2P35612 726 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 IGHMBP2P38935 993 aaKnown RBP22.88■■□□□ 1.25
GMDS-201ENST00000380805 PHKA1P46020 1223 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 EZH2Q15910 746 aaKnown RBP22.88■■□□□ 1.25
GMDS-201ENST00000380805 CAMKK2Q96RR4 588 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 LRRC4BQ9NT99 713 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 DDX49Q9Y6V7 483 aaKnown RBP22.88■■□□□ 1.25
GMDS-201ENST00000380805 FAM177BA6PVY3 158 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 ZSCAN22P10073 491 aaPredicted RBP22.88■■□□□ 1.25
GMDS-201ENST00000380805 UBE3CQ15386 1083 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 TXNRD1Q16881 649 aa22.88■■□□□ 1.25
GMDS-201ENST00000380805 GOLGA6L3A6NEY3 463 aa22.87■■□□□ 1.25
GMDS-201ENST00000380805 GJB2P29033 226 aa22.87■■□□□ 1.25
GMDS-201ENST00000380805 BAG6P46379 1132 aa22.87■■□□□ 1.25
GMDS-201ENST00000380805 FBXL16Q8N461 479 aa22.87■■□□□ 1.25
GMDS-201ENST00000380805 CDC5LQ99459 802 aaKnown RBP22.87■■□□□ 1.25
GMDS-201ENST00000380805 CTNNA3Q9UI47 895 aa22.87■■□□□ 1.25
GMDS-201ENST00000380805 TCHHQ07283 1943 aa22.86■■□□□ 1.25
GMDS-201ENST00000380805 DHX32Q7L7V1 743 aaKnown RBP22.86■■□□□ 1.25
GMDS-201ENST00000380805 CCNL1Q9UK58 526 aaPredicted RBP22.86■■□□□ 1.25
GMDS-201ENST00000380805 EXOSC10Q01780 885 aaKnown RBP22.85■■□□□ 1.25
GMDS-201ENST00000380805 ERFEQ4G0M1 354 aa22.85■■□□□ 1.25
GMDS-201ENST00000380805 TMEM87AQ8NBN3 555 aa22.85■■□□□ 1.25
GMDS-201ENST00000380805 TCEANC2Q96MN5 208 aa22.85■■□□□ 1.25
GMDS-201ENST00000380805 PUS7LQ9H0K6 701 aaKnown RBP22.85■■□□□ 1.25
GMDS-201ENST00000380805 PIH1D3Q9NQM4 214 aaKnown RBP22.85■■□□□ 1.25
GMDS-201ENST00000380805 PRPF40AO75400 957 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms