RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 Q6ZUG5 572 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 MAST3O60307 1309 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 MYO5AQ9Y4I1 1855 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 M0R2C6 588 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 ADAMTS2O95450 1211 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 ANKRD1Q15327 319 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 LARP1BQ659C4 914 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 FERMT3Q86UX7 667 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 HSPD1P10809 573 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 ITGA6P23229 1130 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 KRT32Q14532 448 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 OSBP2Q969R2 916 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 RIC1Q4ADV7 1423 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 SPEF2Q9C093 1822 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 RNF113AO15541 343 aaKnown RBP9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 TTC39AQ5SRH9 613 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 GORABQ5T7V8 394 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 TTLL5Q6EMB2 1281 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 PPP1R9BQ96SB3 815 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 RIPOR2Q9Y4F9 1068 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 AHDC1Q5TGY3 1603 aaPredicted RBP9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 SLIT2O94813 1529 aa9.46□□□□□ -0.89
PDLIM5-204ENST00000380176 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 A0A0G2JS52 829 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 SEMA3EO15041 775 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 JAK2O60674 1132 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 ZAP70P43403 619 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 TRMT112Q9UI30 125 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 NWD2Q9ULI1 1742 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 CDHR2Q9BYE9 1310 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 MYH7P12883 1935 aa9.46□□□□□ -0.9
PDLIM5-204ENST00000380176 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 CTSWP56202 376 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 CCDC173Q0VFZ6 552 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 BRF1Q92994 677 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 FOXP2O15409 715 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 UBE2HP62256 183 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
PDLIM5-204ENST00000380176 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 E7EWF7 191 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 SCRN1Q12765 414 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 ESPNB1AK53 854 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 STK25O00506 426 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 IL6STP40189 918 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 MCAMP43121 646 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 ATP2B3Q16720 1220 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 VGLL2Q8N8G2 317 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 PUS7LQ9H0K6 701 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 CNNM1Q9NRU3 951 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
PDLIM5-204ENST00000380176 ANKRD18BA2A2Z9 1011 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 EXOSC10Q01780 885 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 DHX32Q7L7V1 743 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 DDX11Q96FC9 970 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 PPFIA3O75145 1194 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 DDB1Q16531 1140 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 TTC6Q86TZ1 520 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 MARCH10Q8NA82 808 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 TSPY26PQ9H489 355 aa9.43□□□□□ -0.9
PDLIM5-204ENST00000380176 NUTM2BA6NNL0 878 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 NUTM2EB1AL46 878 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 PDE8AO60658 829 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 EIF5P55010 431 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 HAND2P61296 217 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 NUTM2AQ8IVF1 878 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms