RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 LRP10Q7Z4F1 713 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 CCDC112Q8NEF3 446 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
TRIM6-203ENST00000380107 FER1L4A9Z1Z3 1794 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 SMTNL1A8MU46 457 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 E7EWF7 191 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 KINO60870 393 aaKnown RBP10.22□□□□□ -0.77
TRIM6-203ENST00000380107 STX1AQ16623 288 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 CEP135Q66GS9 1140 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 CCDC73Q6ZRK6 1079 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 TTC5Q8N0Z6 440 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 KBTBD3Q8NAB2 608 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 ZSCAN16Q9H4T2 348 aaPredicted RBP10.22□□□□□ -0.77
TRIM6-203ENST00000380107 PAG1Q9NWQ8 432 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
TRIM6-203ENST00000380107 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 ADGRL3Q9HAR2 1447 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 ERBB3P21860 1342 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 CSB-PGBD3P0DP91 1061 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
TRIM6-203ENST00000380107 PHKG2P15735 406 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 PUS3Q9BZE2 481 aaKnown RBP10.22□□□□□ -0.77
TRIM6-203ENST00000380107 RCOR1Q9UKL0 485 aa10.22□□□□□ -0.77
TRIM6-203ENST00000380107 M0R2C6 588 aa10.21□□□□□ -0.77
TRIM6-203ENST00000380107 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
TRIM6-203ENST00000380107 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM6-203ENST00000380107 TTLL7Q6ZT98 887 aa10.21□□□□□ -0.77
TRIM6-203ENST00000380107 KRT28Q7Z3Y7 464 aa10.21□□□□□ -0.77
TRIM6-203ENST00000380107 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.21□□□□□ -0.77
TRIM6-203ENST00000380107 SDF4Q9BRK5 362 aa10.21□□□□□ -0.77
TRIM6-203ENST00000380107 PCDHA7Q9UN72 937 aa10.21□□□□□ -0.77
TRIM6-203ENST00000380107 FDPSP14324 419 aaKnown RBP10.21□□□□□ -0.78
TRIM6-203ENST00000380107 NDUFA8P51970 172 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ATG9AQ7Z3C6 839 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ZNF215Q9UL58 517 aaPredicted RBP10.21□□□□□ -0.78
TRIM6-203ENST00000380107 CLIC4Q9Y696 253 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 MAST3O60307 1309 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 CYP27B1O15528 508 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 SNRPA1P09661 255 aaKnown RBP10.21□□□□□ -0.78
TRIM6-203ENST00000380107 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.78
TRIM6-203ENST00000380107 DPCR1Q3MIW9 517 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ANKLE2Q86XL3 938 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ENGASEQ8NFI3 743 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ZBTB3Q9H5J0 574 aa10.21□□□□□ -0.78
TRIM6-203ENST00000380107 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.78
TRIM6-203ENST00000380107 MYH15Q9Y2K3 1946 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 CCZ1BP86790 482 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 CCZ1P86791 482 aaPredicted RBP10.2□□□□□ -0.78
TRIM6-203ENST00000380107 FOXO4P98177 505 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 EXOSC10Q01780 885 aaKnown RBP10.2□□□□□ -0.78
TRIM6-203ENST00000380107 FAM160A1Q05DH4 1040 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 RABL6Q3YEC7 729 aaPredicted RBP10.2□□□□□ -0.78
TRIM6-203ENST00000380107 DENND2AQ9ULE3 1009 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 MRC1P22897 1456 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 CARMIL3Q8ND23 1372 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
TRIM6-203ENST00000380107 CASP7P55210 303 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 PI16Q6UXB8 463 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 OSBP2Q969R2 916 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 CTNNA3Q9UI47 895 aa10.2□□□□□ -0.78
TRIM6-203ENST00000380107 MEGF6O75095 1541 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 SMC2O95347 1197 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 A1BGP04217 495 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 IFIT1P09914 478 aaKnown RBP10.19□□□□□ -0.78
TRIM6-203ENST00000380107 RXRAP19793 462 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NBPF14Q5TI25 921 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NAA16Q6N069 864 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NBPF10Q6P3W6 841 aaKnown RBP10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NBPF11Q86T75 865 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NBPF15Q8N660 670 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 SH3TC1Q8TE82 1336 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 A0A1B0GUL7 405 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 ADORA1P30542 326 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 ELF2Q15723 593 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 ZMYM1Q5SVZ6 1142 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 LRRN4CLQ8ND94 238 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 NKX2-3Q8TAU0 364 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 MRFAP1L1Q96HT8 127 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 LLPHQ9BRT6 129 aaKnown RBP10.19□□□□□ -0.78
TRIM6-203ENST00000380107 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
TRIM6-203ENST00000380107 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 MARCKSP29966 332 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-203ENST00000380107 CDC25BP30305 580 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 CABP4P57796 275 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 STK38Q15208 465 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 CEP57L1Q8IYX8 460 aa10.18□□□□□ -0.78
TRIM6-203ENST00000380107 FMR1NBQ8N0W7 255 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-203ENST00000380107 MRPS27Q92552 414 aaKnown RBP10.18□□□□□ -0.78
TRIM6-203ENST00000380107 ZNF396Q96N95 335 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-203ENST00000380107 IFNKQ9P0W0 207 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms