RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TPTE2Q6XPS3 522 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 UBE3BQ7Z3V4 1068 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
CDKL5-202ENST00000379996 RAB11FIP3O75154 756 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.9
CDKL5-202ENST00000379996 ABCC12Q96J65 1359 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 SPEF2Q9C093 1822 aa9.4□□□□□ -0.9
CDKL5-202ENST00000379996 IRS4O14654 1257 aaPredicted RBP9.4□□□□□ -0.91
CDKL5-202ENST00000379996 PHF14O94880 888 aa9.4□□□□□ -0.91
CDKL5-202ENST00000379996 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.91
CDKL5-202ENST00000379996 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.91
CDKL5-202ENST00000379996 DDR1Q08345 913 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 RABEP1Q15276 862 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 EPHA10Q5JZY3 1008 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
CDKL5-202ENST00000379996 TTLL11Q8NHH1 800 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
CDKL5-202ENST00000379996 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 GPTP24298 496 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 GOLGA6L3A6NEY3 463 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 PDE1AP54750 535 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 FAM89AQ96GI7 184 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 COL4A1P02462 1669 aa9.38□□□□□ -0.91
CDKL5-202ENST00000379996 AOX1Q06278 1338 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 SERPINB2P05120 415 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 HOXA10P31260 410 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-202ENST00000379996 ERFEQ4G0M1 354 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-202ENST00000379996 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 MRE11P49959 708 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 ST5P78524 1137 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
CDKL5-202ENST00000379996 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 CNBD1Q8NA66 436 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 SRGAP3O43295 1099 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 MFSD10Q14728 455 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
CDKL5-202ENST00000379996 GPR37O15354 613 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
CDKL5-202ENST00000379996 PKP1Q13835 747 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 SMIM5Q71RC9 77 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
CDKL5-202ENST00000379996 EIF5BO60841 1220 aaKnown RBP9.35□□□□□ -0.91
CDKL5-202ENST00000379996 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 CUL4AQ13619 759 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 CRAMP1Q96RY5 1269 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 IL25Q9H293 177 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 DUOX1Q9NRD9 1551 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 TCHHQ07283 1943 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 MYH15Q9Y2K3 1946 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 ANKRD18BA2A2Z9 1011 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-202ENST00000379996 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 ZNF609O15014 1411 aa9.35□□□□□ -0.91
CDKL5-202ENST00000379996 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 PTMSP20962 102 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 PDE6BP35913 854 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 IL15P40933 162 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 ZNF445P59923 1031 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 ATG9AQ7Z3C6 839 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 KIF1BPQ96EK5 621 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 EPB41L2O43491 1005 aaKnown RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 MMP10P09238 476 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 CLCN1P35523 988 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 IFIT5Q13325 482 aaKnown RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 STYK1Q6J9G0 422 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 TMC2Q8TDI7 906 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 EYA2O00167 538 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 ITGA6P23229 1130 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 CCDC57Q2TAC2 916 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 VGLL2Q8N8G2 317 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 GBP4Q96PP9 640 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 PPP1R9BQ96SB3 815 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.91
CDKL5-202ENST00000379996 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 GREM2Q9H772 168 aa9.34□□□□□ -0.91
CDKL5-202ENST00000379996 RIPOR2Q9Y4F9 1068 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms