RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 SIPA1L3O60292 1781 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 ATF3P18847 181 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 CCZ1BP86790 482 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 CCZ1P86791 482 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 TMEM57Q8N5G2 664 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 STK31Q9BXU1 1019 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 PLEKHA4Q9H4M7 779 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 TNS3Q68CZ2 1445 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 USP8P40818 1118 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 CCNHP51946 323 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 SCRN1Q12765 414 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 EPC1Q9H2F5 836 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 CBX8Q9HC52 389 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 KCND1Q9NSA2 647 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 VPS18Q9P253 973 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 MCM8Q9UJA3 840 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 COQ9O75208 318 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 TADA3O75528 432 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 GCFC2P16383 781 aaKnown RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 GRIK3Q13003 919 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 NEDD9Q14511 834 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 CCDC158Q5M9N0 1113 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 C1QTNF12Q5T7M4 302 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 ZNF483Q8TF39 744 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 KCNB2Q92953 911 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-201ENST00000379989 COL18A1P39060 1754 aa8.68□□□□□ -1.02
CDKL5-201ENST00000379989 WDR33Q9C0J8 1336 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 EPB41L2O43491 1005 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 GPTP24298 496 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 EIF5P55010 431 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 MTA1Q13330 715 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 FMNL3Q8IVF7 1028 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 N4BP2L2Q92802 583 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 THOC1Q96FV9 657 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 VEZTQ9HBM0 779 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 GNAI3P08754 354 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 LIG3P49916 1009 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 INTS4Q96HW7 963 aaKnown RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 MRC1P22897 1456 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 EME2A4GXA9 379 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 NEMFO60524 1076 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 CDC25BP30305 580 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 NEK4P51957 841 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 TYRO3Q06418 890 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 GORABQ5T7V8 394 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 CCDC26Q8TAB7 109 aa8.67□□□□□ -1.02
CDKL5-201ENST00000379989 TRIM6Q9C030 488 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-201ENST00000379989 ATP10DQ9P241 1426 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 MYBL2P10244 700 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 TSPYL4Q9UJ04 414 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 PXDNQ92626 1479 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 RGS12O14924 1447 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 PPFIA4O75335 1185 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 TDRD7Q8NHU6 1098 aaKnown RBP8.66□□□□□ -1.02
CDKL5-201ENST00000379989 CCDC69A6NI79 296 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 FIBPO43427 364 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 RTN2O75298 545 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 GCP02774 474 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 KRT28Q7Z3Y7 464 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
CDKL5-201ENST00000379989 MAP2K7O14733 419 aa8.65□□□□□ -1.02
CDKL5-201ENST00000379989 ANO6Q4KMQ2 910 aa8.65□□□□□ -1.02
CDKL5-201ENST00000379989 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.02
CDKL5-201ENST00000379989 PAIP2Q9BPZ3 127 aaKnown RBP8.65□□□□□ -1.02
CDKL5-201ENST00000379989 EFCAB8A8MWE9 144 aa8.65□□□□□ -1.03
CDKL5-201ENST00000379989 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.03
CDKL5-201ENST00000379989 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.03
CDKL5-201ENST00000379989 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.03
CDKL5-201ENST00000379989 TEX13AQ9BXU3 409 aaPredicted RBP8.65□□□□□ -1.03
CDKL5-201ENST00000379989 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.03
CDKL5-201ENST00000379989 AOX1Q06278 1338 aa8.65□□□□□ -1.03
CDKL5-201ENST00000379989 EXOC5O00471 708 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 AP1G2O75843 785 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 CRYMQ14894 314 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 POTEDQ86YR6 584 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 ERCC4Q92889 916 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-201ENST00000379989 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 SH3GL3Q99963 347 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 DCTPP1Q9H773 170 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 PDE11AQ9HCR9 933 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 HEG1Q9ULI3 1381 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 ANKRD18BA2A2Z9 1011 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 EVCP57679 992 aa8.64□□□□□ -1.03
CDKL5-201ENST00000379989 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms