RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
SH3KBP1-202ENST00000379698 C16orf45Q96MC5 204 aaPredicted RBP15.29■□□□□ 0.04
SH3KBP1-202ENST00000379698 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
SH3KBP1-202ENST00000379698 ALS2Q96Q42 1657 aa15.29■□□□□ 0.04
SH3KBP1-202ENST00000379698 BECN2A8MW95 431 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 HSPD1P10809 573 aaKnown RBP15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 C11orf57Q6ZUT1 292 aaPredicted RBP15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 FBXL16Q8N461 479 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 MYH15Q9Y2K3 1946 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 CYP27B1O15528 508 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 CABP4P57796 275 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 GOLPH3LQ9H4A5 285 aa15.28■□□□□ 0.04
SH3KBP1-202ENST00000379698 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.04
SH3KBP1-202ENST00000379698 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
SH3KBP1-202ENST00000379698 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.04
SH3KBP1-202ENST00000379698 LAMA4Q16363 1823 aa15.27■□□□□ 0.04
SH3KBP1-202ENST00000379698 RNF113AO15541 343 aaKnown RBP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 LRRC8AQ8IWT6 810 aa15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 NAT10Q9H0A0 1025 aaKnown RBP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 LAMB4A4D0S4 1761 aa15.27■□□□□ 0.03
SH3KBP1-202ENST00000379698 ME1P48163 572 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 LRRFIP1Q32MZ4 808 aaKnown RBP15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 CEP57L1Q8IYX8 460 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 MAST3O60307 1309 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 SPEF2Q9C093 1822 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 IFIT1P09914 478 aaKnown RBP15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 EVCP57679 992 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 TIMM10P62072 90 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 CCDC9Q9Y3X0 531 aaKnown RBP15.26■□□□□ 0.03
SH3KBP1-202ENST00000379698 CARMIL3Q8ND23 1372 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 EYA2O00167 538 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 CIAO1O76071 339 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 FOSBP53539 338 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 PROSER2Q86WR7 435 aaPredicted RBP15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 PRDM4Q9UKN5 801 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 MRPS27Q92552 414 aaKnown RBP15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
SH3KBP1-202ENST00000379698 PKD1L3Q7Z443 1732 aa15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 UTP14CQ5TAP6 766 aaKnown RBP15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 ADALQ6DHV7 355 aa15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 DHX40Q8IX18 779 aaKnown RBP15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 GLI3P10071 1580 aa15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 FEZ1Q99689 392 aa15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 COL18A1P39060 1754 aa15.24■□□□□ 0.03
SH3KBP1-202ENST00000379698 ATP2B3Q16720 1220 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 SLFNL1Q499Z3 407 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 CEP135Q66GS9 1140 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 DHX16O60231 1041 aaKnown RBP15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 CBX1P83916 185 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 NBPF10Q6P3W6 841 aaKnown RBP15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 PCDHA7Q9UN72 937 aa15.23■□□□□ 0.03
SH3KBP1-202ENST00000379698 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 SKILP12757 684 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 GSDMDP57764 484 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 FDPSP14324 419 aaKnown RBP15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 ZSCAN20P17040 1043 aaPredicted RBP15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 DMTNQ08495 405 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 SDF4Q9BRK5 362 aa15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
SH3KBP1-202ENST00000379698 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 M0R2C6 588 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 YEATS4O95619 227 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 IMMTQ16891 758 aaKnown RBP15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 LRRC24Q50LG9 513 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 KCND1Q9NSA2 647 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 A0A0G2JLW4 131 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 SF3A1Q15459 793 aaKnown RBP15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 TTLL7Q6ZT98 887 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 AOPEPQ8N6M6 819 aa15.21■□□□□ 0.03
SH3KBP1-202ENST00000379698 LINC00301Q8NCQ3 95 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms