RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 LIMCH1Q9UPQ0 1083 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 LRRIQ3A6PVS8 624 aaPredicted RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 POTEB2H3BUK9 544 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 FAM163BP0C2L3 166 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 FNTAP49354 379 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 MYLK4Q86YV6 388 aaPredicted RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 CEP57L1Q8IYX8 460 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 FAM76AQ8TAV0 307 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 RMI1Q9H9A7 625 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 LMCD1Q9NZU5 365 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 NPHP3Q7Z494 1330 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 NDUFAB1O14561 156 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 ANKZF1Q9H8Y5 726 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 ARHGEF11O15085 1522 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 MTHFSP49914 203 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 GNGT1P63211 74 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 GOLGA8FQ08AF8 430 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 GOLGA8DPQ0D2H9 430 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 LAMB3Q13751 1172 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 CAPRIN2Q6IMN6 1127 aaKnown RBP9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 CDKL5O76039 1030 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 VSNL1P62760 191 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 B4GALNT4Q76KP1 1039 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 GDAP1L1Q96MZ0 367 aa9.73□□□□□ -0.85
NHLRC3-201ENST00000379599 SYNMO15061 1565 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 NOS1P29475 1434 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 TPD52L2O43399 206 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 FSBPO95073 299 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 PYGBP11216 843 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 CPA1P15085 419 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 PSME1Q06323 249 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 SRGAP1Q7Z6B7 1085 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 DHX40Q8IX18 779 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 CAPS2Q9BXY5 557 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 ANO10Q9NW15 660 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 ZNF202O95125 648 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 RBM43Q6ZSC3 357 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 B4GALNT2Q8NHY0 566 aa9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
NHLRC3-201ENST00000379599 MSH6P52701 1360 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 CDHR2Q9BYE9 1310 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 MEFVO15553 781 aaPredicted RBP9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 KCNJ6P48051 423 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 RCSD1Q6JBY9 416 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 RUFY3Q7L099 469 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 ACRBPQ8NEB7 543 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 CCDC114Q96M63 670 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 CARD14Q9BXL6 1004 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 IRX2Q9BZI1 471 aaPredicted RBP9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 PPP2R2CQ9Y2T4 447 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 ABCC11Q96J66 1382 aa9.71□□□□□ -0.85
NHLRC3-201ENST00000379599 GOLGA6CA6NDK9 693 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 LARGE1O95461 756 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 GOLGA6DP0CG33 693 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 NEFHP12036 1026 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 TPP2P29144 1249 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 LEO1Q8WVC0 666 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 SLC40A1Q9NP59 571 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 GOLGA6AQ9NYA3 693 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 CFDP1Q9UEE9 299 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 SYF2O95926 243 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 OATP04181 439 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 USP5P45974 858 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 SLC8A3P57103 927 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 CDC37L1Q7L3B6 337 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 NECAB1Q8N987 351 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
NHLRC3-201ENST00000379599 CHMLP26374 656 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 CDC25CP30307 473 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 SMTNP53814 917 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 CDCA2Q69YH5 1023 aaPredicted RBP9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 TBC1D31Q96DN5 1066 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 CUTAO60888 179 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 RTN3O95197 1032 aaPredicted RBP9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 MAGEA8P43361 318 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 PTPN21Q16825 1174 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 SLC30A9Q6PML9 568 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 MICALCLQ6ZW33 695 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 ZCWPW1Q9H0M4 648 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 RAB21Q9UL25 225 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 EVC2Q86UK5 1308 aa9.7□□□□□ -0.86
NHLRC3-201ENST00000379599 LRRIQ1Q96JM4 1722 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 TLDC1Q6P9B6 456 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 SPATA21Q7Z572 469 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 MSL3Q8N5Y2 521 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms