RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 OSBP2Q969R2 916 aa17.68■□□□□ 0.42
PRNP-201ENST00000379440 TOM1O60784 492 aa17.67■□□□□ 0.42
PRNP-201ENST00000379440 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
PRNP-201ENST00000379440 ANKRD1Q15327 319 aa17.67■□□□□ 0.42
PRNP-201ENST00000379440 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
PRNP-201ENST00000379440 TMEM63CQ9P1W3 806 aa17.67■□□□□ 0.42
PRNP-201ENST00000379440 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
PRNP-201ENST00000379440 USP48Q86UV5 1035 aa17.67■□□□□ 0.42
PRNP-201ENST00000379440 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
PRNP-201ENST00000379440 F13A1P00488 732 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 BRD2P25440 801 aaKnown RBP17.66■□□□□ 0.42
PRNP-201ENST00000379440 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
PRNP-201ENST00000379440 LRRC2Q9BYS8 371 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 Q6ZUG5 572 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 VGLL2Q8N8G2 317 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 DSCC1Q9BVC3 393 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 MTMR6Q9Y217 621 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 CNPY2Q9Y2B0 182 aa17.66■□□□□ 0.42
PRNP-201ENST00000379440 ZNF445P59923 1031 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 HELBQ8NG08 1087 aaPredicted RBP17.65■□□□□ 0.42
PRNP-201ENST00000379440 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 PDCL3Q9H2J4 239 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 TCHHQ07283 1943 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 MCAMP43121 646 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
PRNP-201ENST00000379440 MYH3P11055 1940 aa17.64■□□□□ 0.42
PRNP-201ENST00000379440 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
PRNP-201ENST00000379440 PDE8BO95263 885 aa17.64■□□□□ 0.41
PRNP-201ENST00000379440 KCNQ4P56696 695 aa17.64■□□□□ 0.41
PRNP-201ENST00000379440 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
PRNP-201ENST00000379440 TICAM2Q86XR7 235 aa17.64■□□□□ 0.41
PRNP-201ENST00000379440 C8orf37Q96NL8 207 aa17.64■□□□□ 0.41
PRNP-201ENST00000379440 MYH14Q7Z406 1995 aaKnown RBP17.63■□□□□ 0.41
PRNP-201ENST00000379440 MBD3O95983 291 aa17.63■□□□□ 0.41
PRNP-201ENST00000379440 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
PRNP-201ENST00000379440 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
PRNP-201ENST00000379440 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
PRNP-201ENST00000379440 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
PRNP-201ENST00000379440 PUS7LQ9H0K6 701 aaKnown RBP17.63■□□□□ 0.41
PRNP-201ENST00000379440 SNAP23O00161 211 aa17.62■□□□□ 0.41
PRNP-201ENST00000379440 BRF1Q92994 677 aa17.62■□□□□ 0.41
PRNP-201ENST00000379440 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
PRNP-201ENST00000379440 NIP7Q9Y221 180 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRNP-201ENST00000379440 SYCE3A1L190 88 aa17.62■□□□□ 0.41
PRNP-201ENST00000379440 E7EWF7 191 aa17.62■□□□□ 0.41
PRNP-201ENST00000379440 FOXP2O15409 715 aa17.61■□□□□ 0.41
PRNP-201ENST00000379440 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
PRNP-201ENST00000379440 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
PRNP-201ENST00000379440 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
PRNP-201ENST00000379440 CLCN1P35523 988 aa17.61■□□□□ 0.41
PRNP-201ENST00000379440 PHKA1P46020 1223 aa17.61■□□□□ 0.41
PRNP-201ENST00000379440 DNM1Q05193 864 aaKnown RBP17.61■□□□□ 0.41
PRNP-201ENST00000379440 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
PRNP-201ENST00000379440 PTF1AQ7RTS3 328 aa17.61■□□□□ 0.41
PRNP-201ENST00000379440 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 FIBPO43427 364 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
PRNP-201ENST00000379440 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
PRNP-201ENST00000379440 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 CHST3Q7LGC8 479 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 JAK2O60674 1132 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 FERMT3Q86UX7 667 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 IPO4Q8TEX9 1081 aaKnown RBP17.6■□□□□ 0.41
PRNP-201ENST00000379440 APPBP2Q92624 585 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
PRNP-201ENST00000379440 GTF3C6Q969F1 213 aa17.6■□□□□ 0.41
PRNP-201ENST00000379440 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
PRNP-201ENST00000379440 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 RBSNQ9H1K0 784 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 NTSR2O95665 410 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
PRNP-201ENST00000379440 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
PRNP-201ENST00000379440 HAND2P61296 217 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
PRNP-201ENST00000379440 LINC00116Q8NCU8 138 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 AK7Q96M32 723 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 PIH1D3Q9NQM4 214 aaKnown RBP17.59■□□□□ 0.41
PRNP-201ENST00000379440 LAMA4Q16363 1823 aa17.59■□□□□ 0.41
PRNP-201ENST00000379440 AKAP11Q9UKA4 1901 aa17.58■□□□□ 0.41
PRNP-201ENST00000379440 FGFR2P21802 821 aa17.58■□□□□ 0.41
PRNP-201ENST00000379440 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.41
PRNP-201ENST00000379440 PARP10Q53GL7 1025 aa17.58■□□□□ 0.41
PRNP-201ENST00000379440 MPHOSPH8Q99549 860 aa17.58■□□□□ 0.41
PRNP-201ENST00000379440 ABCC12Q96J65 1359 aa17.58■□□□□ 0.41
PRNP-201ENST00000379440 MROH5Q6ZUA9 1318 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 FGAP02671 866 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 SCRN1Q12765 414 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 FAM173BQ6P4H8 233 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 LPIN2Q92539 896 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.4
PRNP-201ENST00000379440 BCL9LQ86UU0 1499 aa17.58■□□□□ 0.4
PRNP-201ENST00000379440 SLC9C2Q5TAH2 1124 aa17.57■□□□□ 0.4
PRNP-201ENST00000379440 GPAA1O43292 621 aa17.57■□□□□ 0.4
PRNP-201ENST00000379440 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
PRNP-201ENST00000379440 LRSAM1Q6UWE0 723 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms