RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLC27A3Q5K4L6 730 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 SMC3Q9UQE7 1217 aa12.5□□□□□ -0.41
POLR2J3-201ENST00000379340 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 ZFYP08048 801 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 RPS6KB1P23443 525 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 TIMM10P62072 90 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 ZMYM1Q5SVZ6 1142 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 ARAP2Q8WZ64 1704 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
POLR2J3-201ENST00000379340 GOLIM4O00461 696 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 GORABQ5T7V8 394 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 ZNF512BQ96KM6 892 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 ATP6V1DQ9Y5K8 247 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 MYH7P12883 1935 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 LY75O60449 1722 aa12.48□□□□□ -0.41
POLR2J3-201ENST00000379340 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 ITGA6P23229 1130 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 GPTP24298 496 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 RGL2O15211 777 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 CPA1P15085 419 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 SIK1P57059 783 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 ATP2B3Q16720 1220 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 METTL24Q5JXM2 366 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
POLR2J3-201ENST00000379340 KIF3CO14782 793 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 STX6O43752 255 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 ZNF445P59923 1031 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 CCDC83Q8IWF9 413 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 TMEM87AQ8NBN3 555 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 NEK1Q96PY6 1258 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 GREM2Q9H772 168 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.42
POLR2J3-201ENST00000379340 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 LARGE1O95461 756 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 XRCC6P12956 609 aaKnown RBP eCLIP12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 PDCP20941 246 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 ME3Q16798 604 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 CNNM1Q9NRU3 951 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 UBN2Q6ZU65 1347 aa12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-201ENST00000379340 SYT1P21579 422 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 GJB2P29033 226 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 CHMP4CQ96CF2 233 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 SEC62Q99442 399 aaKnown RBP12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 MAST3O60307 1309 aa12.44□□□□□ -0.42
POLR2J3-201ENST00000379340 CAMTA2O94983 1202 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 PDE8BO95263 885 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 F13A1P00488 732 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 CYP21A2P08686 494 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 UQCRFS1P1P0C7P4 283 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 ADORA1P30542 326 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 CTNNA3Q9UI47 895 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms