RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 KIF2AO00139 706 aaPredicted RBP12.47□□□□□ -0.41
LINC00654-201ENST00000379053 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
LINC00654-201ENST00000379053 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 GGA1Q9UJY5 639 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 URI1O94763 535 aaPredicted RBP12.46□□□□□ -0.41
LINC00654-201ENST00000379053 CCDC117Q8IWD4 279 aaPredicted RBP12.46□□□□□ -0.41
LINC00654-201ENST00000379053 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 FAM13AO94988 1023 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 ASIC1P78348 528 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00654-201ENST00000379053 CWF19L2Q2TBE0 894 aaKnown RBP12.46□□□□□ -0.41
LINC00654-201ENST00000379053 PARP10Q53GL7 1025 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
LINC00654-201ENST00000379053 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
LINC00654-201ENST00000379053 N4BP3O15049 544 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 KRT79Q5XKE5 535 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 ESPNB1AK53 854 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 STX1AQ16623 288 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 TCEANC2Q96MN5 208 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 DENND2AQ9ULE3 1009 aa12.46□□□□□ -0.42
LINC00654-201ENST00000379053 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 H7C1D1 291 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 AKR1B10O60218 316 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 CALML3P27482 149 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 SAP30BPQ9UHR5 308 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 UQCRHP07919 91 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 SYKP43405 635 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 RBM8AQ9Y5S9 174 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 RNF113AO15541 343 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 APBB1IPQ7Z5R6 666 aaPredicted RBP12.45□□□□□ -0.42
LINC00654-201ENST00000379053 OTUD6BQ8N6M0 293 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 IP6K1Q92551 441 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 ARHGAP45Q92619 1136 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
LINC00654-201ENST00000379053 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 NECAB1Q8N987 351 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 TMC6Q7Z403 805 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 EYA1Q99502 592 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 PLVAPQ9BX97 442 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 HOXC9P31274 260 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 GNA11P29992 359 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
LINC00654-201ENST00000379053 INCENPQ9NQS7 918 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
LINC00654-201ENST00000379053 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
LINC00654-201ENST00000379053 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 TBX22Q9Y458 520 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 FERP16591 822 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 MCM3P25205 808 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 TFCP2Q12800 502 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 MAST3O60307 1309 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 PARP1P09874 1014 aaKnown RBP12.43□□□□□ -0.42
LINC00654-201ENST00000379053 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
LINC00654-201ENST00000379053 Q6ZUG5 572 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
LINC00654-201ENST00000379053 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
LINC00654-201ENST00000379053 TRIM75PA6NK02 468 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 TMCO3Q6UWJ1 677 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 TRPM2O94759 1503 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
LINC00654-201ENST00000379053 PSMA7O14818 248 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 GJC1P36383 396 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
LINC00654-201ENST00000379053 KIAA0753Q2KHM9 967 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
LINC00654-201ENST00000379053 SPC25Q9HBM1 224 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms