RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 PI4KAP2A4QPH2 592 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 IGSF3O75054 1194 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 TADA3O75528 432 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 DDX58O95786 925 aaKnown RBP9.53□□□□□ -0.88
PTPRR-203ENST00000378778 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 BRAPQ7Z569 592 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 AOPEPQ8N6M6 819 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 PI4KAP1Q8N8J0 262 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 PHAXQ9H814 394 aaKnown RBP9.53□□□□□ -0.88
PTPRR-203ENST00000378778 C9orf78Q9NZ63 289 aaPredicted RBP9.53□□□□□ -0.88
PTPRR-203ENST00000378778 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 ERCC6LQ2NKX8 1250 aa9.52□□□□□ -0.88
PTPRR-203ENST00000378778 FSIP1Q8NA03 581 aa9.52□□□□□ -0.88
PTPRR-203ENST00000378778 HEG1Q9ULI3 1381 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 SH3TC1Q8TE82 1336 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 HOXC9P31274 260 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 BRD3Q15059 726 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 FAM173BQ6P4H8 233 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 DHX32Q7L7V1 743 aaKnown RBP9.52□□□□□ -0.89
PTPRR-203ENST00000378778 NSUN7Q8NE18 718 aaKnown RBP9.52□□□□□ -0.89
PTPRR-203ENST00000378778 GOLGA5Q8TBA6 731 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 FAM227BQ96M60 508 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 POLR3EQ9NVU0 708 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 IVLP07476 585 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.89
PTPRR-203ENST00000378778 EVCP57679 992 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 PDE4CQ08493 712 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 SYT10Q6XYQ8 523 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 Q6ZUG5 572 aa9.52□□□□□ -0.89
PTPRR-203ENST00000378778 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
PTPRR-203ENST00000378778 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 TMC6Q7Z403 805 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 SDF4Q9BRK5 362 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 DSCC1Q9BVC3 393 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 GOLPH3LQ9H4A5 285 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 ADAMTS7Q9UKP4 1686 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 GRM8O00222 908 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 DHX16O60231 1041 aaKnown RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 RPS6KA5O75582 802 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 MCMDC2Q4G0Z9 681 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 XPO4Q9C0E2 1151 aaKnown RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 ARFGAP3Q9NP61 516 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
PTPRR-203ENST00000378778 FEZ2Q9UHY8 353 aaPredicted RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 NAP1L2Q9ULW6 460 aaPredicted RBP9.51□□□□□ -0.89
PTPRR-203ENST00000378778 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 SASH1O94885 1247 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 ME1P48163 572 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 ARID5BQ14865 1188 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 EAF2Q96CJ1 260 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-203ENST00000378778 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 CHPF2Q9P2E5 772 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 SLIT3O75094 1523 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 WDR19Q8NEZ3 1342 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 FAM237AA0A1B0GTK4 181 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 CCDC151A5D8V7 595 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 JAK2O60674 1132 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 SMC2O95347 1197 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
PTPRR-203ENST00000378778 CMA1P23946 247 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
PTPRR-203ENST00000378778 SCRN1Q12765 414 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 CT47A1Q5JQC4 288 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-203ENST00000378778 AKAP4Q5JQC9 854 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 GOLGA6L1Q8N7Z2 621 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 USP28Q96RU2 1077 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 RASSF4Q9H2L5 321 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 COPRSQ9NQ92 184 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 IFNKQ9P0W0 207 aa9.5□□□□□ -0.89
PTPRR-203ENST00000378778 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 TNRQ92752 1358 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 PLEKHG2Q9H7P9 1386 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 PTPDC1A2A3K4 754 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
PTPRR-203ENST00000378778 RSRC2Q7L4I2 434 aaKnown RBP9.49□□□□□ -0.89
PTPRR-203ENST00000378778 FBXO18Q8NFZ0 1043 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 TUBE1Q9UJT0 475 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 LTN1O94822 1766 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 STX10O60499 249 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 CAPN2P17655 700 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 FANCCQ00597 558 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 RAD51AP2Q09MP3 1159 aa9.49□□□□□ -0.89
PTPRR-203ENST00000378778 JMYQ8N9B5 988 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms