RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ZC3H12CQ9C0D7 883 aaKnown RBP21.46■■□□□ 1.03
RER1-202ENST00000378512 ZNF408Q9H9D4 720 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 TLL2Q9Y6L7 1015 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 MED23Q9ULK4 1368 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
RER1-202ENST00000378512 ZNF609O15014 1411 aa21.45■■□□□ 1.02
RER1-202ENST00000378512 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
RER1-202ENST00000378512 RBM26Q5T8P6 1007 aaKnown RBP21.45■■□□□ 1.02
RER1-202ENST00000378512 USP48Q86UV5 1035 aa21.45■■□□□ 1.02
RER1-202ENST00000378512 DPF2Q92785 391 aa21.45■■□□□ 1.02
RER1-202ENST00000378512 API5Q9BZZ5 524 aaKnown RBP21.45■■□□□ 1.02
RER1-202ENST00000378512 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
RER1-202ENST00000378512 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
RER1-202ENST00000378512 LEMD3Q9Y2U8 911 aa21.44■■□□□ 1.02
RER1-202ENST00000378512 ASTN2O75129 1339 aaPredicted RBP21.43■■□□□ 1.02
RER1-202ENST00000378512 AOC2O75106 756 aa21.43■■□□□ 1.02
RER1-202ENST00000378512 ANKRD44Q8N8A2 993 aa21.43■■□□□ 1.02
RER1-202ENST00000378512 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
RER1-202ENST00000378512 ANKRD2Q9GZV1 360 aa21.43■■□□□ 1.02
RER1-202ENST00000378512 IRS2Q9Y4H2 1338 aa21.42■■□□□ 1.02
RER1-202ENST00000378512 VIL1P09327 827 aaKnown RBP21.42■■□□□ 1.02
RER1-202ENST00000378512 CTCFP49711 727 aaPredicted RBP21.42■■□□□ 1.02
RER1-202ENST00000378512 LBX1P52954 281 aa21.42■■□□□ 1.02
RER1-202ENST00000378512 CCDC57Q2TAC2 916 aa21.42■■□□□ 1.02
RER1-202ENST00000378512 SAPCD2Q86UD0 394 aa21.42■■□□□ 1.02
RER1-202ENST00000378512 BICC1Q9H694 974 aaKnown RBP21.42■■□□□ 1.02
RER1-202ENST00000378512 ADM5C9JUS6 153 aa21.41■■□□□ 1.02
RER1-202ENST00000378512 CHRNDQ07001 517 aa21.41■■□□□ 1.02
RER1-202ENST00000378512 CDC37L1Q7L3B6 337 aa21.41■■□□□ 1.02
RER1-202ENST00000378512 HSPA8P11142 646 aaKnown RBP21.4■■□□□ 1.02
RER1-202ENST00000378512 RPS12P25398 132 aaKnown RBP21.4■■□□□ 1.02
RER1-202ENST00000378512 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
RER1-202ENST00000378512 PODNQ7Z5L7 613 aa21.4■■□□□ 1.02
RER1-202ENST00000378512 ZNF804BA4D1E1 1349 aa21.4■■□□□ 1.02
RER1-202ENST00000378512 G3V3G9 751 aa21.39■■□□□ 1.02
RER1-202ENST00000378512 BCAR3O75815 825 aa21.39■■□□□ 1.02
RER1-202ENST00000378512 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.02
RER1-202ENST00000378512 C15orf52Q6ZUT6 534 aaKnown RBP21.39■■□□□ 1.02
RER1-202ENST00000378512 ZNF594Q96JF6 807 aaPredicted RBP21.39■■□□□ 1.02
RER1-202ENST00000378512 CHMP3Q9Y3E7 222 aa21.39■■□□□ 1.02
RER1-202ENST00000378512 KIF4BQ2VIQ3 1234 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 TXNRD3Q86VQ6 643 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 PRDM10Q9NQV6 1147 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
RER1-202ENST00000378512 TRIM27P14373 513 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 ECE1P42892 770 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 MAP2K1Q02750 393 aaPredicted RBP21.38■■□□□ 1.01
RER1-202ENST00000378512 RSBN1LQ6PCB5 846 aaPredicted RBP21.38■■□□□ 1.01
RER1-202ENST00000378512 LDHAL6AQ6ZMR3 332 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 KRT26Q7Z3Y9 468 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 MXD3Q9BW11 206 aa21.38■■□□□ 1.01
RER1-202ENST00000378512 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
RER1-202ENST00000378512 KLRK1P26718 216 aa21.37■■□□□ 1.01
RER1-202ENST00000378512 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
RER1-202ENST00000378512 TSKSQ9UJT2 592 aa21.37■■□□□ 1.01
RER1-202ENST00000378512 RIPOR2Q9Y4F9 1068 aa21.37■■□□□ 1.01
RER1-202ENST00000378512 ZIC5Q96T25 663 aa21.36■■□□□ 1.01
RER1-202ENST00000378512 GMLQ99445 158 aa21.36■■□□□ 1.01
RER1-202ENST00000378512 COA1Q9GZY4 146 aa21.36■■□□□ 1.01
RER1-202ENST00000378512 GGA3Q9NZ52 723 aa21.36■■□□□ 1.01
RER1-202ENST00000378512 SCAF8Q9UPN6 1271 aaKnown RBP21.35■■□□□ 1.01
RER1-202ENST00000378512 TAF5LO75529 589 aa21.34■■□□□ 1.01
RER1-202ENST00000378512 RFX5P48382 616 aaPredicted RBP21.34■■□□□ 1.01
RER1-202ENST00000378512 ZNF280AP59817 542 aaPredicted RBP21.34■■□□□ 1.01
RER1-202ENST00000378512 TAF7LQ5H9L4 462 aa21.34■■□□□ 1.01
RER1-202ENST00000378512 PUS3Q9BZE2 481 aaKnown RBP21.34■■□□□ 1.01
RER1-202ENST00000378512 USP17L3A6NCW0 530 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 USP17L4A6NCW7 530 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 SNAP23O00161 211 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
RER1-202ENST00000378512 USP17L1Q7RTZ2 530 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 AGBL3Q8NEM8 1001 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 HELBQ8NG08 1087 aaPredicted RBP21.33■■□□□ 1.01
RER1-202ENST00000378512 DCPSQ96C86 337 aaKnown RBP21.33■■□□□ 1.01
RER1-202ENST00000378512 CNNM1Q9NRU3 951 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
RER1-202ENST00000378512 HUNKP57058 714 aa21.32■■□□□ 1
RER1-202ENST00000378512 SCARF1Q14162 830 aa21.32■■□□□ 1
RER1-202ENST00000378512 MEIS3Q99687 375 aa21.32■■□□□ 1
RER1-202ENST00000378512 MROH5Q6ZUA9 1318 aa21.32■■□□□ 1
RER1-202ENST00000378512 UBE4AQ14139 1066 aa21.31■■□□□ 1
RER1-202ENST00000378512 DACT2Q5SW24 774 aa21.31■■□□□ 1
RER1-202ENST00000378512 ANGEL2Q5VTE6 544 aaKnown RBP21.31■■□□□ 1
RER1-202ENST00000378512 VGLL2Q8N8G2 317 aa21.31■■□□□ 1
RER1-202ENST00000378512 FBXW7Q969H0 707 aa21.31■■□□□ 1
RER1-202ENST00000378512 HHIPL1Q96JK4 782 aa21.31■■□□□ 1
RER1-202ENST00000378512 USP17L8P0C7I0 530 aa21.3■■□□□ 1
RER1-202ENST00000378512 MAP2K2P36507 400 aa21.3■■□□□ 1
RER1-202ENST00000378512 PTPN12Q05209 780 aaKnown RBP21.3■■□□□ 1
RER1-202ENST00000378512 LRRC24Q50LG9 513 aa21.3■■□□□ 1
RER1-202ENST00000378512 STRIP1Q5VSL9 837 aa21.3■■□□□ 1
RER1-202ENST00000378512 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
RER1-202ENST00000378512 GBA2Q9HCG7 927 aaPredicted RBP21.3■■□□□ 1
RER1-202ENST00000378512 MYOZ2Q9NPC6 264 aa21.3■■□□□ 1
RER1-202ENST00000378512 HDAC5Q9UQL6 1122 aa21.3■■□□□ 1
RER1-202ENST00000378512 KCNJ4P48050 445 aa21.29■■□□□ 1
RER1-202ENST00000378512 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
RER1-202ENST00000378512 CDCA5Q96FF9 252 aa21.29■■□□□ 1
RER1-202ENST00000378512 CD209Q9NNX6 404 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms