RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 MAFGO15525 162 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 PAX3P23760 479 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 ARHGEF10O15013 1369 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 USP21Q9UK80 565 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 NAP1L1P55209 391 aaKnown RBP12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 PAX7P23759 505 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 CCDC158Q5M9N0 1113 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
PCDHGA1-201ENST00000378105 KCNQ3O43525 872 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 IGHDP01880 384 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 MNS1Q8NEH6 495 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 NUCKS1Q9H1E3 243 aaKnown RBP12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 FOSBP53539 338 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
PCDHGA1-201ENST00000378105 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 GBP4Q96PP9 640 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 PAIP2Q9BPZ3 127 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 ATRNO75882 1429 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 RFC4P35249 363 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 PTPRCP08575 1304 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 A1BGP04217 495 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 TRDNQ13061 729 aa12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 DHX8Q14562 1220 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-201ENST00000378105 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 ITFG2Q969R8 447 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 TEX13AQ9BXU3 409 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 KIF1CO43896 1103 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 MNAT1P51948 309 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 C1QTNF12Q5T7M4 302 aa12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-201ENST00000378105 CALRP27797 417 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 RMI1Q9H9A7 625 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 BCL9O00512 1426 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 IPO7O95373 1038 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 TMEM165Q9HC07 324 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
PCDHGA1-201ENST00000378105 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
PCDHGA1-201ENST00000378105 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 CHL1O00533 1208 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 NEK4P51957 841 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 ANKRD7Q92527 254 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 AP1G2O75843 785 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 CYP2C19P33261 490 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 SYCE3A1L190 88 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms