RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 BBXQ8WY36 941 aaPredicted RBP18.51■□□□□ 0.55
RGP1-201ENST00000378078 ANAPC4Q9UJX5 808 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 PPP1R12AO14974 1030 aaPredicted RBP18.51■□□□□ 0.55
RGP1-201ENST00000378078 SEPT14Q6ZU15 432 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
RGP1-201ENST00000378078 SH2B1Q9NRF2 756 aaPredicted RBP18.51■□□□□ 0.55
RGP1-201ENST00000378078 RRP36Q96EU6 259 aaKnown RBP18.5■□□□□ 0.55
RGP1-201ENST00000378078 SELENOOQ9BVL4 669 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 ANO6Q4KMQ2 910 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 PA2G4Q9UQ80 394 aaKnown RBP18.5■□□□□ 0.55
RGP1-201ENST00000378078 TLDC2A0PJX2 215 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 IFRD2Q12894 506 aaPredicted RBP18.5■□□□□ 0.55
RGP1-201ENST00000378078 MCM6Q14566 821 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 FCHSD1Q86WN1 690 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 PSMD6Q15008 389 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 E7EVH7 732 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 MCM5P33992 734 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 RASAL2Q9UJF2 1139 aa18.5■□□□□ 0.55
RGP1-201ENST00000378078 IFI16Q16666 785 aaKnown RBP18.49■□□□□ 0.55
RGP1-201ENST00000378078 TRIM6Q9C030 488 aaPredicted RBP18.49■□□□□ 0.55
RGP1-201ENST00000378078 CEP83Q9Y592 693 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 SEC62Q99442 399 aaKnown RBP18.49■□□□□ 0.55
RGP1-201ENST00000378078 PTPDC1A2A3K4 754 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 KSR1Q8IVT5 923 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 ATRIPQ8WXE1 791 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 TNPO1Q92973 898 aaKnown RBP18.49■□□□□ 0.55
RGP1-201ENST00000378078 BRF1Q92994 677 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 GPHNQ9NQX3 736 aaPredicted RBP18.49■□□□□ 0.55
RGP1-201ENST00000378078 UBXN1Q04323 297 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 BIRC3Q13489 604 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 SLC9C2Q5TAH2 1124 aa18.49■□□□□ 0.55
RGP1-201ENST00000378078 USH1GQ495M9 461 aa18.48■□□□□ 0.55
RGP1-201ENST00000378078 RPUSD2Q8IZ73 545 aaKnown RBP18.48■□□□□ 0.55
RGP1-201ENST00000378078 ZC3H12CQ9C0D7 883 aaKnown RBP18.48■□□□□ 0.55
RGP1-201ENST00000378078 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
RGP1-201ENST00000378078 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
RGP1-201ENST00000378078 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
RGP1-201ENST00000378078 ZCRB1Q8TBF4 217 aaKnown RBP18.48■□□□□ 0.55
RGP1-201ENST00000378078 TCP10Q12799 353 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 GAS8O95995 478 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 CUL4BQ13620 913 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 CCDC172P0C7W6 258 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
RGP1-201ENST00000378078 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
RGP1-201ENST00000378078 UBLCP1Q8WVY7 318 aaPredicted RBP18.47■□□□□ 0.55
RGP1-201ENST00000378078 RSPH14Q9UHP6 348 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 ANKRD13DQ6ZTN6 518 aa18.47■□□□□ 0.55
RGP1-201ENST00000378078 CTAGE5O15320 804 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 RNF169Q8NCN4 708 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 C4orf50Q6ZRC1 276 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 KRT23Q9C075 422 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 TBC1D7Q9P0N9 293 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 ZEB2O60315 1214 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 RMND1Q9NWS8 449 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 GUCA1BQ9UMX6 200 aa18.46■□□□□ 0.55
RGP1-201ENST00000378078 ATP6V0A2Q9Y487 856 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 LZTFL1Q9NQ48 299 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 ECHDC1Q9NTX5 307 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
RGP1-201ENST00000378078 USTQ9Y2C2 406 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 RHOXF2BP0C7M4 288 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 CNGA1P29973 690 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 KRT2P35908 639 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 TMOD4Q9NZQ9 345 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 KRT19P08727 400 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
RGP1-201ENST00000378078 PPP4R4Q6NUP7 873 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 ESR2Q92731 530 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 GTF3C6Q969F1 213 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 LRRC27Q9C0I9 530 aa18.45■□□□□ 0.54
RGP1-201ENST00000378078 RAD51AP2Q09MP3 1159 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 SMC6Q96SB8 1091 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 ZNF165P49910 485 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 APOBRQ0VD83 1088 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 FAM200AQ8TCP9 573 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 PLEKHA4Q9H4M7 779 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
RGP1-201ENST00000378078 CCT6AP40227 531 aaKnown RBP18.44■□□□□ 0.54
RGP1-201ENST00000378078 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 CTNND2Q9UQB3 1225 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 NOP56O00567 594 aaKnown RBP18.44■□□□□ 0.54
RGP1-201ENST00000378078 GNPATO15228 680 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 RABEP2Q9H5N1 569 aa18.44■□□□□ 0.54
RGP1-201ENST00000378078 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
RGP1-201ENST00000378078 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.43■□□□□ 0.54
RGP1-201ENST00000378078 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
RGP1-201ENST00000378078 DDB1Q16531 1140 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms