RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CCDC178Q5BJE1 867 aa21.45■■□□□ 1.02
CNTNAP3B-203ENST00000377561 PNMA6EA0A0J9YXQ4 647 aa21.45■■□□□ 1.02
CNTNAP3B-203ENST00000377561 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
CNTNAP3B-203ENST00000377561 CUL5Q93034 780 aa21.45■■□□□ 1.02
CNTNAP3B-203ENST00000377561 VPS36Q86VN1 386 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 FAM114A1Q8IWE2 563 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 RMND1Q9NWS8 449 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SGSM2O43147 1006 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 PLBD2Q8NHP8 589 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 RTL1A6NKG5 1358 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 IRS4O14654 1257 aaPredicted RBP21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SKILP12757 684 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 MARCKSP29966 332 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TAF3Q5VWG9 929 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 NAA16Q6N069 864 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SMARCC1Q92922 1105 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 AOPEPQ8N6M6 819 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 KDM5DQ9BY66 1539 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 CHST3Q7LGC8 479 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 IQSEC3Q9UPP2 1182 aaPredicted RBP21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 CPA1P15085 419 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 RPS6KB1P23443 525 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 VAT1LQ9HCJ6 419 aa21.43■■□□□ 1.02
CNTNAP3B-203ENST00000377561 IBSPP21815 317 aaPredicted RBP21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 RFC4P35249 363 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 ZHX1Q9UKY1 873 aaPredicted RBP21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 BRAPQ7Z569 592 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 CFAP65Q6ZU64 1925 aaKnown RBP21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 ATL3Q6DD88 541 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 DNAI2Q9GZS0 605 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 IDEP14735 1019 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 PPP4R3AQ6IN85 833 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 UBA5Q9GZZ9 404 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 NLRP3Q96P20 1036 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 STX8Q9UNK0 236 aa21.42■■□□□ 1.02
CNTNAP3B-203ENST00000377561 MYOM2P54296 1465 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 N4BP3O15049 544 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 POTEB2H3BUK9 544 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SLC27A2O14975 620 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 GNAQP50148 359 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 EYA2O00167 538 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TMEM2Q9UHN6 1383 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TDRD12Q587J7 1177 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SCLT1Q96NL6 688 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 CTAGE1Q96RT6 745 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
CNTNAP3B-203ENST00000377561 LRRC27Q9C0I9 530 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 PAFAH1B1P43034 410 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 MAGEB6P1A0A0J9YX57 407 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TSPY3P0CV98 308 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TSPY8P0CW00 308 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 PLEKHF1Q96S99 279 aa21.4■■□□□ 1.02
CNTNAP3B-203ENST00000377561 GNG11P61952 73 aa21.39■■□□□ 1.02
CNTNAP3B-203ENST00000377561 ACSBG1Q96GR2 724 aa21.39■■□□□ 1.02
CNTNAP3B-203ENST00000377561 TMX1Q9H3N1 280 aa21.39■■□□□ 1.02
CNTNAP3B-203ENST00000377561 HLA-DOAP06340 250 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CALM1P0DP23 149 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CALM2P0DP24 149 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CALM3P0DP25 149 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 AFMP43652 599 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 DDB1Q16531 1140 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 SLC4A8Q2Y0W8 1093 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 RTL9Q8NET4 1388 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 TRIM75PA6NK02 468 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 RRAGBQ5VZM2 374 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
CNTNAP3B-203ENST00000377561 SPAG1Q07617 926 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 TRIM47Q96LD4 638 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 CCDC40Q4G0X9 1142 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 SLC52A2Q9HAB3 445 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 MAGEB6Q8N7X4 407 aa21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.38■■□□□ 1.01
CNTNAP3B-203ENST00000377561 A0A1B0GUL7 405 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 DBNDD2Q9BQY9 259 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 HELBQ8NG08 1087 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 WDHD1O75717 1129 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 TIMM10P62072 90 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 PPP4R3BQ5MIZ7 849 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 ALS2CR12Q96Q35 445 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 EXOC1Q9NV70 894 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 STAT6P42226 847 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 ST5P78524 1137 aa21.37■■□□□ 1.01
CNTNAP3B-203ENST00000377561 FAM135BQ49AJ0 1406 aa21.36■■□□□ 1.01
CNTNAP3B-203ENST00000377561 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
CNTNAP3B-203ENST00000377561 FAM227BQ96M60 508 aa21.36■■□□□ 1.01
CNTNAP3B-203ENST00000377561 ORAI2Q96SN7 254 aa21.36■■□□□ 1.01
CNTNAP3B-203ENST00000377561 HSPA4P34932 840 aa21.35■■□□□ 1.01
CNTNAP3B-203ENST00000377561 LLPHQ9BRT6 129 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms