RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 H7C1W4 665 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
SF1-205ENST00000377394 CERS3Q8IU89 383 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 PFKFB2O60825 505 aa16.23■□□□□ 0.19
SF1-205ENST00000377394 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 CABP4P57796 275 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 SLFNL1Q499Z3 407 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 ADD1P35611 737 aaKnown RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 TPD52L1Q16890 204 aaPredicted RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 CABLES1Q8TDN4 633 aa16.22■□□□□ 0.19
SF1-205ENST00000377394 LLPHQ9BRT6 129 aaKnown RBP16.22■□□□□ 0.19
SF1-205ENST00000377394 H3BQV1 296 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 NPHP1O15259 732 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 IFFO2Q5TF58 517 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
SF1-205ENST00000377394 CTDNEP1O95476 244 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
SF1-205ENST00000377394 FBXO38Q6PIJ6 1188 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
SF1-205ENST00000377394 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
SF1-205ENST00000377394 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
SF1-205ENST00000377394 TMEM94Q12767 1356 aa16.21■□□□□ 0.18
SF1-205ENST00000377394 GOLIM4O00461 696 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
SF1-205ENST00000377394 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
SF1-205ENST00000377394 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
SF1-205ENST00000377394 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 TULP2O00295 520 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 USP27XA6NNY8 438 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 TIMM10P62072 90 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
SF1-205ENST00000377394 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
SF1-205ENST00000377394 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
SF1-205ENST00000377394 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 A0A0G2JLW4 131 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 ELF2Q15723 593 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 CEP135Q66GS9 1140 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 NAA16Q6N069 864 aaPredicted RBP16.19■□□□□ 0.18
SF1-205ENST00000377394 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
SF1-205ENST00000377394 ZNF75DP51815 510 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
SF1-205ENST00000377394 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 TRIM5Q9C035 493 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 DNAJC25Q9H1X3 360 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 CALCOCO1Q9P1Z2 691 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 IL15P40933 162 aaPredicted RBP16.18■□□□□ 0.18
SF1-205ENST00000377394 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 ZNF446Q9NWS9 450 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
SF1-205ENST00000377394 FAM53CQ9NYF3 392 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 RCOR1Q9UKL0 485 aa16.18■□□□□ 0.18
SF1-205ENST00000377394 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
SF1-205ENST00000377394 ZNF165P49910 485 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 TJP1Q07157 1748 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 E7EWF7 191 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
SF1-205ENST00000377394 LRRC24Q50LG9 513 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
SF1-205ENST00000377394 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 MAST3O60307 1309 aa16.17■□□□□ 0.18
SF1-205ENST00000377394 CEBPZQ03701 1054 aaKnown RBP16.16■□□□□ 0.18
SF1-205ENST00000377394 SLC20A2Q08357 652 aa16.16■□□□□ 0.18
SF1-205ENST00000377394 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■■□ 23.1
SF1-205ENST00000377394 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
SF1-205ENST00000377394 EYA2O00167 538 aa16.16■□□□□ 0.18
SF1-205ENST00000377394 ATF3P18847 181 aa16.16■□□□□ 0.18
SF1-205ENST00000377394 TAF7LQ5H9L4 462 aa16.16■□□□□ 0.18
SF1-205ENST00000377394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.16■□□□□ 0.18
SF1-205ENST00000377394 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
SF1-205ENST00000377394 ZNF594Q96JF6 807 aaPredicted RBP16.16■□□□□ 0.18
SF1-205ENST00000377394 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SF1-205ENST00000377394 FOSBP53539 338 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 CCT2P78371 535 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms