RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 BRF1Q92994 677 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 HCLS1P14317 486 aaPredicted RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 SYKP43405 635 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 USP37Q86T82 979 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 ERMNQ8TAM6 284 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.43e-6■□□□□ 9.7
MDC1-201ENST00000376406 WTAPQ15007 396 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 DRC1Q96MC2 740 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 TRMT1Q9NXH9 659 aaKnown RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 BIN1O00499 593 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 AOX1Q06278 1338 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 GOLGA6L7A0A1B0GV03 622 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 HOXC9P31274 260 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 KIF4AO95239 1232 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 ZBTB43O43298 467 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
MDC1-201ENST00000376406 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 H0YIN7 160 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 CALM1P0DP23 149 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 CALM2P0DP24 149 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 CALM3P0DP25 149 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 CTAGE1Q96RT6 745 aa12.57□□□□□ -0.4
MDC1-201ENST00000376406 NEBLO76041 1014 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 CHMLP26374 656 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 CLCN1P35523 988 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 GBP2P32456 591 aaPredicted RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 AK2P54819 239 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 NCBP1Q09161 790 aaKnown RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 HS1BP3Q53T59 392 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 CREB3L3Q68CJ9 461 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 IL13P35225 146 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 ALS2CR12Q96Q35 445 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 ALG1Q9BT22 464 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 PTPRTO14522 1441 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 GNPATO15228 680 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
MDC1-201ENST00000376406 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
MDC1-201ENST00000376406 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 NEFHP12036 1026 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 ENOX2Q16206 610 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 SEC24BO95487 1268 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 CBX1P83916 185 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 IFIT1BQ5T764 474 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 EYA1Q99502 592 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 NPHP4O75161 1426 aaPredicted RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
MDC1-201ENST00000376406 RTN1Q16799 776 aa12.55□□□□□ -0.4
MDC1-201ENST00000376406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■□□□ 11.7
MDC1-201ENST00000376406 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 DENND2AQ9ULE3 1009 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 ERICH4A6NGS2 130 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 UBASH3AP57075 661 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 SLC4A4Q9Y6R1 1079 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
MDC1-201ENST00000376406 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 CYP7A1P22680 504 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
MDC1-201ENST00000376406 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
MDC1-201ENST00000376406 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
MDC1-201ENST00000376406 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
MDC1-201ENST00000376406 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 CALML3P27482 149 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 USP8P40818 1118 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
MDC1-201ENST00000376406 PAFAH1B1P43034 410 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
MDC1-201ENST00000376406 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
MDC1-201ENST00000376406 HELLSQ9NRZ9 838 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 ATL3Q6DD88 541 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 TUBB4AP04350 444 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms