RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 NDUFB9Q9Y6M9 179 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 PTPN12Q05209 780 aaKnown RBP15.18■□□□□ 0.02
MSH5-204ENST00000375755 LMBR1LQ6UX01 489 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
MSH5-204ENST00000375755 ZNF165P49910 485 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 ME3Q16798 604 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 JAKMIP1Q96N16 626 aaKnown RBP15.17■□□□□ 0.02
MSH5-204ENST00000375755 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
MSH5-204ENST00000375755 ELP1O95163 1332 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
MSH5-204ENST00000375755 FOXO4P98177 505 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 HSP90AB4PQ58FF6 505 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 RBM43Q6ZSC3 357 aaKnown RBP15.17■□□□□ 0.02
MSH5-204ENST00000375755 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 CERS3Q8IU89 383 aa15.17■□□□□ 0.02
MSH5-204ENST00000375755 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
MSH5-204ENST00000375755 TJP1Q07157 1748 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 LARP1BQ659C4 914 aaKnown RBP15.16■□□□□ 0.02
MSH5-204ENST00000375755 LRRC8AQ8IWT6 810 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 CLSTN2Q9H4D0 955 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 ZNF446Q9NWS9 450 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 CCDC171Q6TFL3 1326 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 HLFQ16534 295 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
MSH5-204ENST00000375755 ZSCAN31Q96LW9 406 aaPredicted RBP15.16■□□□□ 0.02
MSH5-204ENST00000375755 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
MSH5-204ENST00000375755 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
MSH5-204ENST00000375755 SPATA31A1Q5TZJ5 1347 aa15.16■□□□□ 0.02
MSH5-204ENST00000375755 BCL9O00512 1426 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 PTH1RQ03431 593 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 TFCP2Q12800 502 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 PTPN14Q15678 1187 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 EDC3Q96F86 508 aaKnown RBP15.15■□□□□ 0.02
MSH5-204ENST00000375755 CAPN2P17655 700 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 TRERF1Q96PN7 1200 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 DDX19AQ9NUU7 478 aaKnown RBP15.15■□□□□ 0.02
MSH5-204ENST00000375755 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
MSH5-204ENST00000375755 H7C1W4 665 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 CDC25BP30305 580 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
MSH5-204ENST00000375755 NR1I2O75469 434 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 CHGBP05060 677 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 PRPF40BQ6NWY9 871 aaKnown RBP15.14■□□□□ 0.01
MSH5-204ENST00000375755 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
MSH5-204ENST00000375755 ZSWIM6Q9HCJ5 1215 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 ECHDC1Q9NTX5 307 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 WNK3Q9BYP7 1800 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 GOLGA6L4A6NEF3 574 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 TULP2O00295 520 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 GPTP24298 496 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 RABL6Q3YEC7 729 aaPredicted RBP15.14■□□□□ 0.01
MSH5-204ENST00000375755 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
MSH5-204ENST00000375755 CYP46A1Q9Y6A2 500 aa15.14■□□□□ 0.01
MSH5-204ENST00000375755 NPHP1O15259 732 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 SKILP12757 684 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 FAM89AQ96GI7 184 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 DDB1Q16531 1140 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
MSH5-204ENST00000375755 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
MSH5-204ENST00000375755 ERC1Q8IUD2 1116 aa15.13■□□□□ 0.01
MSH5-204ENST00000375755 LEO1Q8WVC0 666 aaPredicted RBP15.13■□□□□ 0.01
MSH5-204ENST00000375755 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 KCNQ2O43526 872 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 CYP19A1P11511 503 aaPredicted RBP15.12■□□□□ 0.01
MSH5-204ENST00000375755 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 TTC41PQ6P2S7 1318 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 GLRX3O76003 335 aaKnown RBP15.12■□□□□ 0.01
MSH5-204ENST00000375755 SLU7O95391 586 aaKnown RBP15.12■□□□□ 0.01
MSH5-204ENST00000375755 LRRC24Q50LG9 513 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 PGBD1Q96JS3 809 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 SCAND2PQ9GZW5 306 aaPredicted RBP15.12■□□□□ 0.01
MSH5-204ENST00000375755 COPRSQ9NQ92 184 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
MSH5-204ENST00000375755 TBC1D2BQ9UPU7 963 aa15.12■□□□□ 0.01
MSH5-204ENST00000375755 CCZ1BP86790 482 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
MSH5-204ENST00000375755 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 IQCB1Q15051 598 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 C8orf37Q96NL8 207 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
MSH5-204ENST00000375755 TM6SF1Q9BZW5 370 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 KCNQ4P56696 695 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
MSH5-204ENST00000375755 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
MSH5-204ENST00000375755 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 CYP2C19P33261 490 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 SARM1Q6SZW1 724 aa15.11■□□□□ 0.01
MSH5-204ENST00000375755 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms