RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 Q6ZUG5 572 aa17.89■□□□□ 0.45
MSH5-203ENST00000375750 PDCP20941 246 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 DMTNQ08495 405 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 C11orf57Q6ZUT1 292 aaPredicted RBP17.88■□□□□ 0.45
MSH5-203ENST00000375750 UBE3BQ7Z3V4 1068 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 PLA2G4DQ86XP0 818 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 ZNF592Q92610 1267 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
MSH5-203ENST00000375750 HDAC5Q9UQL6 1122 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 LAMB4A4D0S4 1761 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 SLC4A9Q96Q91 983 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 DNAJC2Q99543 621 aaKnown RBP17.88■□□□□ 0.45
MSH5-203ENST00000375750 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 SPATA31A5Q5VU36 1347 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 SPATA31A7Q8IWB4 1347 aa17.88■□□□□ 0.45
MSH5-203ENST00000375750 A0A087WZG4 1122 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 USP27XA6NNY8 438 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 TNNT1P13805 278 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 NCBP1Q09161 790 aaKnown RBP17.87■□□□□ 0.45
MSH5-203ENST00000375750 RNF20Q5VTR2 975 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 ANKRD7Q92527 254 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 ACSBG1Q96GR2 724 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 THRAP3Q9Y2W1 955 aaKnown RBP17.87■□□□□ 0.45
MSH5-203ENST00000375750 MED23Q9ULK4 1368 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 BCL9O00512 1426 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 TPM3P06753 285 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 RESTQ13127 1097 aa17.87■□□□□ 0.45
MSH5-203ENST00000375750 CTIFO43310 598 aaKnown RBP17.86■□□□□ 0.45
MSH5-203ENST00000375750 GUCY1B3Q02153 619 aa17.86■□□□□ 0.45
MSH5-203ENST00000375750 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
MSH5-203ENST00000375750 DBNLQ9UJU6 430 aaKnown RBP17.86■□□□□ 0.45
MSH5-203ENST00000375750 H3BQV1 296 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 GTF3C6Q969F1 213 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 NGLY1Q96IV0 654 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 DDX19AQ9NUU7 478 aaKnown RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 ITGB4P16144 1822 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 HIP1O00291 1037 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 TFCP2Q12800 502 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 ANKRD1Q15327 319 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 NEK1Q96PY6 1258 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 GOLPH3LQ9H4A5 285 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.85■□□□□ 0.45
MSH5-203ENST00000375750 V9GYY5 206 aaPredicted RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 NRAPQ86VF7 1730 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 SCRN1Q12765 414 aa17.85■□□□□ 0.45
MSH5-203ENST00000375750 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 RBM43Q6ZSC3 357 aaKnown RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
MSH5-203ENST00000375750 SLIT2O94813 1529 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 CYP21A2P08686 494 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 CCT2P78371 535 aaKnown RBP17.84■□□□□ 0.45
MSH5-203ENST00000375750 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
MSH5-203ENST00000375750 STARD3NLO95772 234 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
MSH5-203ENST00000375750 SNRKQ9NRH2 765 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
MSH5-203ENST00000375750 NCOA5Q9HCD5 579 aaKnown RBP17.83■□□□□ 0.45
MSH5-203ENST00000375750 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
MSH5-203ENST00000375750 DBNDD2Q9BQY9 259 aa17.83■□□□□ 0.44
MSH5-203ENST00000375750 TRMT1Q9NXH9 659 aaKnown RBP17.83■□□□□ 0.44
MSH5-203ENST00000375750 CASP7P55210 303 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 FGD1P98174 961 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 IQCB1Q15051 598 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 FILIP1Q7Z7B0 1213 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 CCAR1Q8IX12 1150 aaKnown RBP17.82■□□□□ 0.44
MSH5-203ENST00000375750 ZNF609O15014 1411 aa17.82■□□□□ 0.44
MSH5-203ENST00000375750 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
MSH5-203ENST00000375750 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
MSH5-203ENST00000375750 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
MSH5-203ENST00000375750 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
MSH5-203ENST00000375750 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
MSH5-203ENST00000375750 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
MSH5-203ENST00000375750 JCADQ9P266 1359 aa17.8■□□□□ 0.44
MSH5-203ENST00000375750 H7C1W4 665 aa17.8■□□□□ 0.44
MSH5-203ENST00000375750 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
MSH5-203ENST00000375750 WNK3Q9BYP7 1800 aa17.8■□□□□ 0.44
MSH5-203ENST00000375750 TNNI3KQ59H18 835 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 FPGT-TNNI3KV9GXZ4 949 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 SMTNL1A8MU46 457 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 GOLGA6L19H0YKK7 550 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 LRRC8AQ8IWT6 810 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 ALDH8A1Q9H2A2 487 aaPredicted RBP17.79■□□□□ 0.44
MSH5-203ENST00000375750 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 KCNQ2O43526 872 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
MSH5-203ENST00000375750 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 OTUD7BQ6GQQ9 843 aa17.79■□□□□ 0.44
MSH5-203ENST00000375750 BCL9LQ86UU0 1499 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms