RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 NOB1Q9ULX3 412 aaKnown RBP7.46□□□□□ -1.21
UBR4-204ENST00000375254 TADA2BQ86TJ2 420 aa7.46□□□□□ -1.21
UBR4-204ENST00000375254 ALDH1L2Q3SY69 923 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 CKAP2LQ8IYA6 745 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 BCAS4Q8TDM0 211 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 SLFN5Q08AF3 891 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 CNTLNQ9NXG0 1405 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 HMG20BQ9P0W2 317 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 CYP26C1Q6V0L0 522 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 CCT6AP40227 531 aaKnown RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 SYT10Q6XYQ8 523 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 CERS3Q8IU89 383 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 ZSWIM4Q9H7M6 989 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 AKR1B15C9JRZ8 316 aaPredicted RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 CFAP221Q4G0U5 840 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 CCDC51Q96ER9 411 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 WDHD1O75717 1129 aaPredicted RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 LMNB1P20700 586 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.22
UBR4-204ENST00000375254 IQCA1Q86XH1 822 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.46□□□□□ -1.226e-11■■■■□ 20.5
UBR4-204ENST00000375254 FRMD4BQ9Y2L6 1034 aa7.46□□□□□ -1.22
UBR4-204ENST00000375254 RNF14Q9UBS8 474 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ARHGEF9O43307 516 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ZNF75DP51815 510 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 TRIM60Q495X7 471 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 MYO1AQ9UBC5 1043 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 HELBQ8NG08 1087 aaPredicted RBP7.45□□□□□ -1.22
UBR4-204ENST00000375254 CCDC63Q8NA47 563 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 DIABLOQ9NR28 239 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 CCDC151A5D8V7 595 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 FCHSD1Q86WN1 690 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 CNKSR2Q8WXI2 1034 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 CFAP73A6NFT4 308 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBR4-204ENST00000375254 NOP2P46087 812 aaKnown RBP7.45□□□□□ -1.22
UBR4-204ENST00000375254 CFAP157Q5JU67 520 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ARHGEF2Q92974 986 aaKnown RBP7.45□□□□□ -1.22
UBR4-204ENST00000375254 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 CALCOCO2Q13137 446 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ZNF653Q96CK0 615 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ANKRD20A3Q5VUR7 823 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 OLFM3Q96PB7 478 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 TXLNGQ9NUQ3 528 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 SEPT8Q92599 483 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 AKR1B10O60218 316 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 BASP1P80723 227 aaKnown RBP7.45□□□□□ -1.22
UBR4-204ENST00000375254 TBC1D5Q92609 795 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 PSD3Q9NYI0 1048 aa7.45□□□□□ -1.22
UBR4-204ENST00000375254 ELF2Q15723 593 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
UBR4-204ENST00000375254 ZNF569Q5MCW4 686 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 PLPPR3Q6T4P5 718 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 ATP6V0A1Q93050 837 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 CCDC169A6NNP5 214 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 MAP3K7O43318 606 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 CCDC197Q8NCU1 140 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 SIL1Q9H173 461 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 E7ENQ6 273 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 SYNCQ9H7C4 482 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 NDUFA13Q9P0J0 144 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 FKBP5Q13451 457 aaPredicted RBP7.44□□□□□ -1.22
UBR4-204ENST00000375254 SYTL4Q96C24 671 aaPredicted RBP7.44□□□□□ -1.22
UBR4-204ENST00000375254 POLE2P56282 527 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 FSD1Q9BTV5 496 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 MYSM1Q5VVJ2 828 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 KRT18P05783 430 aaKnown RBP7.44□□□□□ -1.22
UBR4-204ENST00000375254 SFSWAPQ12872 951 aaKnown RBP7.44□□□□□ -1.22
UBR4-204ENST00000375254 ANO6Q4KMQ2 910 aa7.44□□□□□ -1.22
UBR4-204ENST00000375254 CLTAP09496 248 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 KRT4P19013 534 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 NEK2P51955 445 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 C8orf76Q96K31 380 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 SERPINI2O75830 405 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 KCNA4P22459 653 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
UBR4-204ENST00000375254 RANBP1P43487 201 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 RAPGEF4Q8WZA2 1011 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 RUNDC3BQ96NL0 473 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 ZCCHC6Q5VYS8 1495 aaKnown RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 HNRNPCP07910 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBR4-204ENST00000375254 SLC44A4Q53GD3 710 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 IFT88Q13099 833 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 PAWRQ96IZ0 340 aaKnown RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 CSRNP2Q9H175 543 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 KCNK9Q9NPC2 374 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 FMN1Q68DA7 1419 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 PSMD2Q13200 908 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 KLHL23Q8NBE8 558 aa7.43□□□□□ -1.22
UBR4-204ENST00000375254 ST13P4Q8IZP2 240 aaPredicted RBP7.43□□□□□ -1.22
UBR4-204ENST00000375254 EPS15L1Q9UBC2 864 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms