RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.19
COL15A1-201ENST00000375001 HPDP32754 393 aaPredicted RBP22.45■■□□□ 1.18
COL15A1-201ENST00000375001 ATP11AP98196 1134 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 ARID5AQ03989 594 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 MAP3K9P80192 1104 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 KCNH5Q8NCM2 988 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 RAB3IL1Q8TBN0 382 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 ANKRD36BQ8N2N9 1353 aa22.45■■□□□ 1.18
COL15A1-201ENST00000375001 TPD52P55327 224 aaPredicted RBP22.45■■□□□ 1.18
COL15A1-201ENST00000375001 TBC1D5Q92609 795 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 VIMP08670 466 aaKnown RBP22.44■■□□□ 1.18
COL15A1-201ENST00000375001 THOC2Q8NI27 1593 aaKnown RBP22.44■■□□□ 1.18
COL15A1-201ENST00000375001 RFC1P35251 1148 aaPredicted RBP22.44■■□□□ 1.18
COL15A1-201ENST00000375001 INTS8Q75QN2 995 aaKnown RBP22.44■■□□□ 1.18
COL15A1-201ENST00000375001 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 FAM114A2Q9NRY5 505 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 CCDC25Q86WR0 208 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 LRRC2Q9BYS8 371 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 HMG20BQ9P0W2 317 aa22.44■■□□□ 1.18
COL15A1-201ENST00000375001 SNRKQ9NRH2 765 aa22.43■■□□□ 1.18
COL15A1-201ENST00000375001 FBXO31Q5XUX0 539 aaPredicted RBP22.43■■□□□ 1.18
COL15A1-201ENST00000375001 PAXIP1Q6ZW49 1069 aaPredicted RBP22.43■■□□□ 1.18
COL15A1-201ENST00000375001 MAP7D1Q3KQU3 841 aa22.43■■□□□ 1.18
COL15A1-201ENST00000375001 UBLCP1Q8WVY7 318 aaPredicted RBP22.43■■□□□ 1.18
COL15A1-201ENST00000375001 ATP2A1O14983 1001 aa22.43■■□□□ 1.18
COL15A1-201ENST00000375001 GSTA5Q7RTV2 222 aa22.43■■□□□ 1.18
COL15A1-201ENST00000375001 DZIP1Q86YF9 867 aaKnown RBP22.42■■□□□ 1.18
COL15A1-201ENST00000375001 FERMT1Q9BQL6 677 aa22.42■■□□□ 1.18
COL15A1-201ENST00000375001 ZBTB40Q9NUA8 1239 aa22.42■■□□□ 1.18
COL15A1-201ENST00000375001 IFT74Q96LB3 600 aa22.42■■□□□ 1.18
COL15A1-201ENST00000375001 RTL1A6NKG5 1358 aa22.42■■□□□ 1.18
COL15A1-201ENST00000375001 ARL1P40616 181 aaPredicted RBP22.42■■□□□ 1.18
COL15A1-201ENST00000375001 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
COL15A1-201ENST00000375001 MAP2K2P36507 400 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 PRPHP41219 470 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 TESK2Q96S53 571 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 PIK3R4Q99570 1358 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 ELF2Q15723 593 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 CACNA2D3Q8IZS8 1091 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
COL15A1-201ENST00000375001 CUL5Q93034 780 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL15A1-201ENST00000375001 KLF18A0A0U1RQI7 1052 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 STAT6P42226 847 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 STXBP4Q6ZWJ1 553 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 NCOA7Q8NI08 942 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 VAT1LQ9HCJ6 419 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 RBM8AQ9Y5S9 174 aaKnown RBP22.41■■□□□ 1.18
COL15A1-201ENST00000375001 PSMA7O14818 248 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 CRACR2BQ8N4Y2 399 aaPredicted RBP22.41■■□□□ 1.18
COL15A1-201ENST00000375001 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 LMBR1Q8WVP7 490 aa22.41■■□□□ 1.18
COL15A1-201ENST00000375001 GJC1P36383 396 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 STX17P56962 302 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 RBSNQ9H1K0 784 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 TMEM110-MUSTN1A8MSY1 372 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 BICDL1Q6ZP65 573 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 MYRIPQ8NFW9 859 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 TRIM7Q9C029 511 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 IFIT5Q13325 482 aaKnown RBP22.4■■□□□ 1.18
COL15A1-201ENST00000375001 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
COL15A1-201ENST00000375001 C17orf53Q8N3J3 647 aaPredicted RBP22.4■■□□□ 1.18
COL15A1-201ENST00000375001 CEP120Q8N960 986 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 CHMP4BP1P59074 171 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 CAVIN4Q5BKX8 364 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 ALG1Q9BT22 464 aa22.4■■□□□ 1.18
COL15A1-201ENST00000375001 LRRC27Q9C0I9 530 aa22.39■■□□□ 1.18
COL15A1-201ENST00000375001 NEDD9Q14511 834 aa22.39■■□□□ 1.17
COL15A1-201ENST00000375001 TTF1Q15361 905 aaPredicted RBP22.39■■□□□ 1.17
COL15A1-201ENST00000375001 ATP5J2-PTCD1G3V325 749 aa22.39■■□□□ 1.17
COL15A1-201ENST00000375001 ZWINTO95229 277 aa22.39■■□□□ 1.17
COL15A1-201ENST00000375001 PNMA8AQ86V59 439 aaPredicted RBP22.39■■□□□ 1.17
COL15A1-201ENST00000375001 POLR3AO14802 1390 aaPredicted RBP22.39■■□□□ 1.17
COL15A1-201ENST00000375001 GPATCH8Q9UKJ3 1502 aaKnown RBP22.39■■□□□ 1.17
COL15A1-201ENST00000375001 DCTPP1Q9H773 170 aa22.39■■□□□ 1.17
COL15A1-201ENST00000375001 MTRF1LQ9UGC7 380 aaKnown RBP22.39■■□□□ 1.17
COL15A1-201ENST00000375001 SWAP70Q9UH65 585 aa22.39■■□□□ 1.17
COL15A1-201ENST00000375001 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 UBXN1Q04323 297 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 PLEKHM2Q8IWE5 1019 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 TNNC1P63316 161 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 FAM184BQ9ULE4 1060 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 GOLGA6CA6NDK9 693 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 CIB2O75838 187 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 GOLGA6DP0CG33 693 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 CCDC110Q8TBZ0 833 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 GOLGA6AQ9NYA3 693 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 PLCB3Q01970 1234 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 CCDC174Q6PII3 467 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 UBE3BQ7Z3V4 1068 aa22.38■■□□□ 1.17
COL15A1-201ENST00000375001 CEP85LQ5SZL2 805 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 DHX58Q96C10 678 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 SEPT14Q6ZU15 432 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 TBCAO75347 108 aaKnown RBP22.37■■□□□ 1.17
COL15A1-201ENST00000375001 STARD3NLO95772 234 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 ALDH3A1P30838 453 aa22.37■■□□□ 1.17
COL15A1-201ENST00000375001 BAG1Q99933 345 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms