RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RABGGTAQ92696 567 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 IFNKQ9P0W0 207 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 CPP00450 1065 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
PRPF4-201ENST00000374198 PSME1Q06323 249 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 RESTQ13127 1097 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 JAKMIP3Q5VZ66 844 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 RUFY2Q8WXA3 655 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
PRPF4-201ENST00000374198 MAP3K9P80192 1104 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 NECTIN1Q15223 517 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 GOLPH3LQ9H4A5 285 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 CXorf56Q9H5V9 222 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 CCDC151A5D8V7 595 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
PRPF4-201ENST00000374198 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
PRPF4-201ENST00000374198 PPP2R3AQ06190 1150 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
PRPF4-201ENST00000374198 MPHOSPH8Q99549 860 aa14.97□□□□□ -0.01
PRPF4-201ENST00000374198 KINO60870 393 aaKnown RBP14.96□□□□□ -0.01
PRPF4-201ENST00000374198 BRD3Q15059 726 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 CCDC73Q6ZRK6 1079 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 MCM10Q7L590 875 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 CEP89Q96ST8 783 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 PDE11AQ9HCR9 933 aa14.96□□□□□ -0.01
PRPF4-201ENST00000374198 ANKARQ7Z5J8 1434 aa14.96□□□□□ -0.02
PRPF4-201ENST00000374198 SRGAP3O43295 1099 aa14.96□□□□□ -0.02
PRPF4-201ENST00000374198 ANKRD1Q15327 319 aa14.96□□□□□ -0.02
PRPF4-201ENST00000374198 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.02
PRPF4-201ENST00000374198 FBXW7Q969H0 707 aa14.96□□□□□ -0.02
PRPF4-201ENST00000374198 DONSONQ9NYP3 566 aa14.96□□□□□ -0.02
PRPF4-201ENST00000374198 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
PRPF4-201ENST00000374198 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
PRPF4-201ENST00000374198 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
PRPF4-201ENST00000374198 TXLNAP40222 546 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 EFCAB13Q8IY85 973 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 RHPN1Q8TCX5 695 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 SPATA31A6Q5VVP1 1343 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 PSMA5P28066 241 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 CEBPZQ03701 1054 aaKnown RBP14.95□□□□□ -0.02
PRPF4-201ENST00000374198 CREB3L3Q68CJ9 461 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 ENGASEQ8NFI3 743 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 SSH3Q8TE77 659 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 GOLGA1Q92805 767 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 MRFAP1Q9Y605 127 aa14.95□□□□□ -0.02
PRPF4-201ENST00000374198 COL9A3Q14050 684 aaPredicted RBP14.94□□□□□ -0.02
PRPF4-201ENST00000374198 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 VWA3AA6NCI4 1184 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 ANKRD65E5RJM6 399 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 ZSCAN12O43309 604 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
PRPF4-201ENST00000374198 FAM160A1Q05DH4 1040 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 LRRC31Q6UY01 552 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 ERCC4Q92889 916 aaPredicted RBP14.94□□□□□ -0.02
PRPF4-201ENST00000374198 BPIFA3Q9BQP9 254 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 RCOR1Q9UKL0 485 aa14.94□□□□□ -0.02
PRPF4-201ENST00000374198 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 MCM6Q14566 821 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 CCDC30Q5VVM6 783 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 NBPF6Q5VWK0 638 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 MSL3Q8N5Y2 521 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 HNRNPLLQ8WVV9 542 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 NUDT16Q96DE0 195 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 DDX11Q96FC9 970 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 NBPF4Q96M43 638 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 UTP14AQ9BVJ6 771 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 RBM8AQ9Y5S9 174 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 ZRSR1Q15695 479 aaKnown RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 HDXQ7Z353 690 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 FCHSD1Q86WN1 690 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 FAM177A1Q8N128 213 aaPredicted RBP14.93□□□□□ -0.02
PRPF4-201ENST00000374198 BRF1Q92994 677 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 AKAP2Q9Y2D5 859 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 FAN1Q9Y2M0 1017 aa14.93□□□□□ -0.02
PRPF4-201ENST00000374198 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 ADD1P35611 737 aaKnown RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 STK3Q13188 491 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 TCEANC2Q96MN5 208 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 WDR24Q96S15 920 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 ALDH8A1Q9H2A2 487 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 H3BQV1 296 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 TOB2Q14106 344 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 BEND6Q5SZJ8 279 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 IFFO2Q5TF58 517 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 BLOC1S2Q6QNY1 142 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 TADA2BQ86TJ2 420 aa14.92□□□□□ -0.02
PRPF4-201ENST00000374198 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
PRPF4-201ENST00000374198 KIF1CO43896 1103 aaKnown RBP14.91□□□□□ -0.02
PRPF4-201ENST00000374198 N4BP1O75113 896 aaKnown RBP14.91□□□□□ -0.02
PRPF4-201ENST00000374198 GNG11P61952 73 aa14.91□□□□□ -0.02
PRPF4-201ENST00000374198 DPCR1Q3MIW9 517 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms