RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 RXRBP28702 533 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 ZNF75DP51815 510 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 WASHC4Q2M389 1173 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 APBA3O96018 575 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 KRT85P78386 507 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
RPRD1B-201ENST00000373433 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 ZNF165P49910 485 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 ECHDC1Q9NTX5 307 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 TFIP11Q9UBB9 837 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
RPRD1B-201ENST00000373433 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 GOLGA6L19H0YKK7 550 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 RAD50Q92878 1312 aa13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 JAKMIP1Q96N16 626 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-201ENST00000373433 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
RPRD1B-201ENST00000373433 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 SKILP12757 684 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 PDRG1Q9NUG6 133 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 TTC14Q96N46 770 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 ROBO1Q9Y6N7 1651 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
RPRD1B-201ENST00000373433 ADCY9O60503 1353 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 TFCP2Q12800 502 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 CCDC171Q6TFL3 1326 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
RPRD1B-201ENST00000373433 HIP1O00291 1037 aa13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 SGSM2O43147 1006 aa13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 HLFQ16534 295 aa13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 SNRKQ9NRH2 765 aa13.02□□□□□ -0.32
RPRD1B-201ENST00000373433 BECN2A8MW95 431 aa13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 PDIA6Q15084 440 aa13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 CAPN2P17655 700 aa13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 ITGA6P23229 1130 aa13.02□□□□□ -0.33
RPRD1B-201ENST00000373433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms