RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 CDKL5O76039 1030 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
LCN2-202ENST00000372998 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 ATF3P18847 181 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 PTGS1P23219 599 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 CASP7P55210 303 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 SCRN1Q12765 414 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
LCN2-202ENST00000372998 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
LCN2-202ENST00000372998 CKAP2LQ8IYA6 745 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
LCN2-202ENST00000372998 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 DBNDD2Q9BQY9 259 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
LCN2-202ENST00000372998 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 MYH7P12883 1935 aa12.72□□□□□ -0.37
LCN2-202ENST00000372998 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 PAPPAQ13219 1627 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 E7EWF7 191 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 FAM193AP78312 1265 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 IQCB1Q15051 598 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
LCN2-202ENST00000372998 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
LCN2-202ENST00000372998 DNAJC25Q9H1X3 360 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
LCN2-202ENST00000372998 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.38
LCN2-202ENST00000372998 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
LCN2-202ENST00000372998 AP5Z1O43299 807 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 TNNT1P13805 278 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 FOXO4P98177 505 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 SF3A1Q15459 793 aaKnown RBP12.7□□□□□ -0.38
LCN2-202ENST00000372998 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 MEGF6O75095 1541 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 TJP1Q07157 1748 aa12.7□□□□□ -0.38
LCN2-202ENST00000372998 GOLIM4O00461 696 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 JAK2O60674 1132 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 ME1P48163 572 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 STK38Q15208 465 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 LRRC8AQ8IWT6 810 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 FSIP1Q8NA03 581 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 PKNOX2Q96KN3 472 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
LCN2-202ENST00000372998 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
LCN2-202ENST00000372998 TRDNQ13061 729 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
LCN2-202ENST00000372998 APPBP2Q92624 585 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
LCN2-202ENST00000372998 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
LCN2-202ENST00000372998 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
LCN2-202ENST00000372998 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
LCN2-202ENST00000372998 CPLX1O14810 134 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
LCN2-202ENST00000372998 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 ATG9AQ7Z3C6 839 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 ELOA2Q8IYF1 753 aaPredicted RBP12.67□□□□□ -0.38
LCN2-202ENST00000372998 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 DDX11Q96FC9 970 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
LCN2-202ENST00000372998 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms