RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 DAAM2Q86T65 1068 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 SPAG1Q07617 926 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 AFMP43652 599 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 MAATS1Q7Z4T9 603 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 CKAP4Q07065 602 aaKnown RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 PSMA7O14818 248 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 UVSSAQ2YD98 709 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 GTPBP4Q9BZE4 634 aaKnown RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 MRVI1Q9Y6F6 885 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
TRERF1-204ENST00000372922 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 FAM13AO94988 1023 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 TMCO4Q5TGY1 634 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 FAM107BQ9H098 131 aa11.23□□□□□ -0.61
TRERF1-204ENST00000372922 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
TRERF1-204ENST00000372922 MSANTD4Q8NCY6 345 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 ASIC1P78348 528 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 CEP112Q8N8E3 955 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
TRERF1-204ENST00000372922 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
TRERF1-204ENST00000372922 UBASH3AP57075 661 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 NUCB1Q02818 461 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 C6orf163Q5TEZ5 329 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 ADCY5O95622 1261 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 Q6ZUG5 572 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 KRT79Q5XKE5 535 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
TRERF1-204ENST00000372922 A0A1W2PRG0 241 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 KRT2P35908 639 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
TRERF1-204ENST00000372922 MAP3K1Q13233 1512 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-204ENST00000372922 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 GNA11P29992 359 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 TAF12Q16514 161 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 HSF2BPO75031 334 aa11.21□□□□□ -0.61
TRERF1-204ENST00000372922 C16orf45Q96MC5 204 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-204ENST00000372922 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
TRERF1-204ENST00000372922 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.62
TRERF1-204ENST00000372922 CFAP57Q96MR6 1250 aa11.21□□□□□ -0.62
TRERF1-204ENST00000372922 TTC31Q49AM3 519 aaPredicted RBP11.21□□□□□ -0.62
TRERF1-204ENST00000372922 OTUD6BQ8N6M0 293 aa11.21□□□□□ -0.62
TRERF1-204ENST00000372922 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.62
TRERF1-204ENST00000372922 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.62
TRERF1-204ENST00000372922 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.62
TRERF1-204ENST00000372922 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 CEP83Q9Y592 693 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 DUOX2Q9NRD8 1548 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 ATP2C2O75185 946 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 TRAPPC3LQ5T215 181 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 MEIS3Q99687 375 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 BICDL2A1A5D9 508 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 RNF113AO15541 343 aaKnown RBP11.2□□□□□ -0.62
TRERF1-204ENST00000372922 SDSP20132 328 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
TRERF1-204ENST00000372922 PCDH11XQ9BZA7 1347 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 PCDH11YQ9BZA8 1340 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 HS2ST1Q7LGA3 356 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 GNG11P61952 73 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 CERS3Q8IU89 383 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 TTC16Q8NEE8 873 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 LRRC2Q9BYS8 371 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 C19orf44Q9H6X5 657 aa11.2□□□□□ -0.62
TRERF1-204ENST00000372922 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
TRERF1-204ENST00000372922 PLCH2O75038 1416 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
TRERF1-204ENST00000372922 ARL1P40616 181 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-204ENST00000372922 CCDC117Q8IWD4 279 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-204ENST00000372922 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 DCAF5Q96JK2 942 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 ATP2A1O14983 1001 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 PDE1AP54750 535 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
TRERF1-204ENST00000372922 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms