RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 ERFEQ4G0M1 354 aa28.31■■■□□ 2.12
LHX3-201ENST00000371746 LPIN2Q92539 896 aa28.31■■■□□ 2.12
LHX3-201ENST00000371746 SMC3Q9UQE7 1217 aa28.31■■■□□ 2.12
LHX3-201ENST00000371746 FGFR2P21802 821 aa28.31■■■□□ 2.12
LHX3-201ENST00000371746 STOX1Q6ZVD7 989 aa28.31■■■□□ 2.12
LHX3-201ENST00000371746 CCNL1Q9UK58 526 aaPredicted RBP28.31■■■□□ 2.12
LHX3-201ENST00000371746 DDX60Q8IY21 1712 aaKnown RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 FOXD4L6Q3SYB3 417 aaPredicted RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 FOXD4L3Q6VB84 417 aaPredicted RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 LMBRD1Q9NUN5 540 aa28.3■■■□□ 2.12
LHX3-201ENST00000371746 ZNF831Q5JPB2 1677 aa28.3■■■□□ 2.12
LHX3-201ENST00000371746 GNPATO15228 680 aa28.3■■■□□ 2.12
LHX3-201ENST00000371746 LRRFIP1Q32MZ4 808 aaKnown RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 C3orf67Q6ZVT6 689 aa28.3■■■□□ 2.12
LHX3-201ENST00000371746 SRP68Q9UHB9 627 aaKnown RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 DDX49Q9Y6V7 483 aaKnown RBP28.3■■■□□ 2.12
LHX3-201ENST00000371746 TBC1D9BQ66K14 1250 aa28.29■■■□□ 2.12
LHX3-201ENST00000371746 AMIGO3Q86WK7 504 aa28.29■■■□□ 2.12
LHX3-201ENST00000371746 BCL2L12Q9HB09 334 aa28.29■■■□□ 2.12
LHX3-201ENST00000371746 BTAF1O14981 1849 aa28.29■■■□□ 2.12
LHX3-201ENST00000371746 PRPF40AO75400 957 aaKnown RBP28.29■■■□□ 2.12
LHX3-201ENST00000371746 ZFYP08048 801 aaPredicted RBP28.29■■■□□ 2.12
LHX3-201ENST00000371746 ZNF512BQ96KM6 892 aaPredicted RBP28.29■■■□□ 2.12
LHX3-201ENST00000371746 PUS7LQ9H0K6 701 aaKnown RBP28.29■■■□□ 2.12
LHX3-201ENST00000371746 HSP90B1P14625 803 aaKnown RBP28.28■■■□□ 2.12
LHX3-201ENST00000371746 IGHMBP2P38935 993 aaKnown RBP28.28■■■□□ 2.12
LHX3-201ENST00000371746 WDR33Q9C0J8 1336 aaKnown RBP28.28■■■□□ 2.12
LHX3-201ENST00000371746 ANKRD1Q15327 319 aa28.28■■■□□ 2.12
LHX3-201ENST00000371746 BCORQ6W2J9 1755 aa28.28■■■□□ 2.12
LHX3-201ENST00000371746 TTLL5Q6EMB2 1281 aa28.27■■■□□ 2.12
LHX3-201ENST00000371746 PIH1D3Q9NQM4 214 aaKnown RBP28.27■■■□□ 2.12
LHX3-201ENST00000371746 FOXP2O15409 715 aa28.27■■■□□ 2.12
LHX3-201ENST00000371746 SYT1P21579 422 aa28.27■■■□□ 2.12
LHX3-201ENST00000371746 GJB2P29033 226 aa28.27■■■□□ 2.12
LHX3-201ENST00000371746 APPBP2Q92624 585 aa28.27■■■□□ 2.12
LHX3-201ENST00000371746 RTL9Q8NET4 1388 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 RPS6KA4O75676 772 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 ARID4AP29374 1257 aaPredicted RBP28.26■■■□□ 2.11
LHX3-201ENST00000371746 COL4A1P02462 1669 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 SLC5A1P13866 664 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 KLHL40Q2TBA0 621 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 RC3H1Q5TC82 1133 aaKnown RBP28.26■■■□□ 2.11
LHX3-201ENST00000371746 LRRC2Q9BYS8 371 aa28.26■■■□□ 2.11
LHX3-201ENST00000371746 ALDH8A1Q9H2A2 487 aaPredicted RBP28.26■■■□□ 2.11
LHX3-201ENST00000371746 IDH1O75874 414 aaKnown RBP28.25■■■□□ 2.11
LHX3-201ENST00000371746 AKAP11Q9UKA4 1901 aa28.25■■■□□ 2.11
LHX3-201ENST00000371746 STK3Q13188 491 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 SLC9C2Q5TAH2 1124 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 NHSQ6T4R5 1651 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 STX6O43752 255 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 SEPT12Q8IYM1 358 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.24■■■□□ 2.11
LHX3-201ENST00000371746 NARFQ9UHQ1 456 aa28.24■■■□□ 2.11
LHX3-201ENST00000371746 GTF2E1P29083 439 aaPredicted RBP28.23■■■□□ 2.11
LHX3-201ENST00000371746 Q6ZUG5 572 aa28.23■■■□□ 2.11
LHX3-201ENST00000371746 UQCRFS1P1P0C7P4 283 aa28.23■■■□□ 2.11
LHX3-201ENST00000371746 CHRNDQ07001 517 aa28.23■■■□□ 2.11
LHX3-201ENST00000371746 RASGRF1Q13972 1273 aa28.23■■■□□ 2.11
LHX3-201ENST00000371746 GOLGA6L3A6NEY3 463 aa28.22■■■□□ 2.11
LHX3-201ENST00000371746 GPAA1O43292 621 aa28.22■■■□□ 2.11
LHX3-201ENST00000371746 NCLP19338 710 aaKnown RBP28.22■■■□□ 2.11
LHX3-201ENST00000371746 ADD2P35612 726 aa28.22■■■□□ 2.11
LHX3-201ENST00000371746 TTF1Q15361 905 aaPredicted RBP28.22■■■□□ 2.11
LHX3-201ENST00000371746 RTCBQ9Y3I0 505 aaKnown RBP28.22■■■□□ 2.11
LHX3-201ENST00000371746 FSD2A1L4K1 749 aa28.21■■■□□ 2.11
LHX3-201ENST00000371746 E7EWF7 191 aa28.21■■■□□ 2.11
LHX3-201ENST00000371746 ZPR1O75312 459 aa28.21■■■□□ 2.11
LHX3-201ENST00000371746 CDC5LQ99459 802 aaKnown RBP28.21■■■□□ 2.11
LHX3-201ENST00000371746 ZSCAN22P10073 491 aaPredicted RBP28.21■■■□□ 2.11
LHX3-201ENST00000371746 SPATA5Q8NB90 893 aa28.21■■■□□ 2.11
LHX3-201ENST00000371746 BCAMP50895 628 aa28.2■■■□□ 2.11
LHX3-201ENST00000371746 HAND2P61296 217 aa28.2■■■□□ 2.11
LHX3-201ENST00000371746 CCDC24Q8N4L8 307 aa28.2■■■□□ 2.11
LHX3-201ENST00000371746 TRPC5Q9UL62 973 aaPredicted RBP28.2■■■□□ 2.11
LHX3-201ENST00000371746 WWC3Q9ULE0 1092 aa28.2■■■□□ 2.11
LHX3-201ENST00000371746 LAMB2P55268 1798 aa28.2■■■□□ 2.1
LHX3-201ENST00000371746 BRF1Q92994 677 aa28.2■■■□□ 2.1
LHX3-201ENST00000371746 SETDB2Q96T68 719 aa28.2■■■□□ 2.1
LHX3-201ENST00000371746 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
LHX3-201ENST00000371746 FGAP02671 866 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 ARHGEF1Q92888 912 aaKnown RBP28.19■■■□□ 2.1
LHX3-201ENST00000371746 GDPD2Q9HCC8 539 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 ATRNO75882 1429 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 SCN7AQ01118 1682 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 PHF14O94880 888 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 FGD1P98174 961 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 SF3B3Q15393 1217 aaKnown RBP28.19■■■□□ 2.1
LHX3-201ENST00000371746 DHX32Q7L7V1 743 aaKnown RBP28.19■■■□□ 2.1
LHX3-201ENST00000371746 GPT2Q8TD30 523 aa28.19■■■□□ 2.1
LHX3-201ENST00000371746 WTIPA6NIX2 430 aaPredicted RBP28.18■■■□□ 2.1
LHX3-201ENST00000371746 ZSCAN25Q6NSZ9 544 aa28.18■■■□□ 2.1
LHX3-201ENST00000371746 ANKRD18AQ8IVF6 992 aa28.18■■■□□ 2.1
LHX3-201ENST00000371746 ZNF532Q9HCE3 1301 aa28.18■■■□□ 2.1
LHX3-201ENST00000371746 HMGB1P09429 215 aaKnown RBP28.18■■■□□ 2.1
LHX3-201ENST00000371746 PDE6AP16499 860 aa28.18■■■□□ 2.1
LHX3-201ENST00000371746 NBPF5PQ86XG9 351 aaPredicted RBP28.18■■■□□ 2.1
LHX3-201ENST00000371746 CAVIN1Q6NZI2 390 aaKnown RBP28.17■■■□□ 2.1
LHX3-201ENST00000371746 CHST3Q7LGC8 479 aa28.17■■■□□ 2.1
LHX3-201ENST00000371746 BRPF3Q9ULD4 1205 aa28.17■■■□□ 2.1
LHX3-201ENST00000371746 MTMR6Q9Y217 621 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms