RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KRT32Q14532 448 aa13.89□□□□□ -0.19
PDE6C-201ENST00000371447 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
PDE6C-201ENST00000371447 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
PDE6C-201ENST00000371447 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
PDE6C-201ENST00000371447 MPHOSPH8Q99549 860 aa13.89□□□□□ -0.19
PDE6C-201ENST00000371447 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
PDE6C-201ENST00000371447 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
PDE6C-201ENST00000371447 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
PDE6C-201ENST00000371447 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 PCCAP05165 728 aaPredicted RBP13.88□□□□□ -0.19
PDE6C-201ENST00000371447 MCAMP43121 646 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 ZMYM1Q5SVZ6 1142 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
PDE6C-201ENST00000371447 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
PDE6C-201ENST00000371447 FGAP02671 866 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 CTSWP56202 376 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 PTPDC1A2A3K4 754 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 PHF14O94880 888 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 POLR3DP05423 398 aaPredicted RBP13.87□□□□□ -0.19
PDE6C-201ENST00000371447 PDCP20941 246 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 GTF3C6Q969F1 213 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 RALYLQ86SE5 291 aaKnown RBP13.87□□□□□ -0.19
PDE6C-201ENST00000371447 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
PDE6C-201ENST00000371447 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDE6C-201ENST00000371447 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
PDE6C-201ENST00000371447 GPAA1O43292 621 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
PDE6C-201ENST00000371447 SUSD4Q5VX71 490 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 JAG2Q9Y219 1238 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 NPHP1O15259 732 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
PDE6C-201ENST00000371447 KCNB2Q92953 911 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
PDE6C-201ENST00000371447 UBN2Q6ZU65 1347 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
PDE6C-201ENST00000371447 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 CPLX1O14810 134 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 IMMTQ16891 758 aaKnown RBP13.85□□□□□ -0.19
PDE6C-201ENST00000371447 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
PDE6C-201ENST00000371447 HELLSQ9NRZ9 838 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 COL18A1P39060 1754 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 ZNF213O14771 459 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 CLCN1P35523 988 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
PDE6C-201ENST00000371447 RBM10P98175 930 aaKnown RBP13.85□□□□□ -0.19
PDE6C-201ENST00000371447 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 ZSCAN30Q86W11 494 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 ARID3AQ99856 593 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 WWC3Q9ULE0 1092 aa13.85□□□□□ -0.19
PDE6C-201ENST00000371447 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 PRC1O43663 620 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 USPL1Q5W0Q7 1092 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 BCAMP50895 628 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
PDE6C-201ENST00000371447 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
PDE6C-201ENST00000371447 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
PDE6C-201ENST00000371447 ADCY5O95622 1261 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 ZNF532Q9HCE3 1301 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 NR1I2O75469 434 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 SIK1P57059 783 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 MAGEB6Q8N7X4 407 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 MARCH10Q8NA82 808 aaPredicted RBP13.83□□□□□ -0.2
PDE6C-201ENST00000371447 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.2
PDE6C-201ENST00000371447 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.2
PDE6C-201ENST00000371447 B4E1Z4 1266 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 CIAO1O76071 339 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 ME1P48163 572 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 PDE8AO60658 829 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 PDE8BO95263 885 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 CTDNEP1O95476 244 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 PDIA3P30101 505 aaKnown RBP13.82□□□□□ -0.2
PDE6C-201ENST00000371447 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 TRDNQ13061 729 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 ITPK1Q13572 414 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 ARMT1Q9H993 441 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 R3HCC1Q9Y3T6 440 aaKnown RBP13.82□□□□□ -0.2
PDE6C-201ENST00000371447 PRKAB2O43741 272 aa13.82□□□□□ -0.2
PDE6C-201ENST00000371447 NSUN7Q8NE18 718 aaKnown RBP13.82□□□□□ -0.2
PDE6C-201ENST00000371447 DSCC1Q9BVC3 393 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms