RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
COL21A1-202ENST00000370817 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.65
COL21A1-202ENST00000370817 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
COL21A1-202ENST00000370817 TATP17735 454 aaPredicted RBP10.96□□□□□ -0.65
COL21A1-202ENST00000370817 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
COL21A1-202ENST00000370817 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.65
COL21A1-202ENST00000370817 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.65
COL21A1-202ENST00000370817 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
COL21A1-202ENST00000370817 ZNF831Q5JPB2 1677 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 PCDH11XQ9BZA7 1347 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 PCDH11YQ9BZA8 1340 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 ESPNB1AK53 854 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 CYP27B1O15528 508 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 LILRA1O75019 489 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
COL21A1-202ENST00000370817 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
COL21A1-202ENST00000370817 MRC1P22897 1456 aa10.94□□□□□ -0.66
COL21A1-202ENST00000370817 SULT6B1Q6IMI4 303 aa10.94□□□□□ -0.66
COL21A1-202ENST00000370817 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
COL21A1-202ENST00000370817 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
COL21A1-202ENST00000370817 UBR2Q8IWV8 1755 aa10.94□□□□□ -0.66
COL21A1-202ENST00000370817 QSER1Q2KHR3 1735 aa10.94□□□□□ -0.66
COL21A1-202ENST00000370817 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
COL21A1-202ENST00000370817 ADH1AP07327 375 aa10.93□□□□□ -0.66
COL21A1-202ENST00000370817 ADD1P35611 737 aaKnown RBP10.93□□□□□ -0.66
COL21A1-202ENST00000370817 CCDC155Q8N6L0 562 aa10.93□□□□□ -0.66
COL21A1-202ENST00000370817 CFAP53Q96M91 514 aa10.93□□□□□ -0.66
COL21A1-202ENST00000370817 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
COL21A1-202ENST00000370817 TRIM37O94972 964 aa10.92□□□□□ -0.66
COL21A1-202ENST00000370817 PHKG2P15735 406 aa10.92□□□□□ -0.66
COL21A1-202ENST00000370817 KDF1Q8NAX2 398 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-202ENST00000370817 POLMQ9NP87 494 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-202ENST00000370817 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-202ENST00000370817 C5P01031 1676 aa10.92□□□□□ -0.66
COL21A1-202ENST00000370817 SLC35F4A4IF30 521 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 KCNQ2O43526 872 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 HMOX1P09601 288 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 KRT76Q01546 638 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 RNF217Q8TC41 542 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 DDX54Q8TDD1 881 aaKnown RBP10.91□□□□□ -0.66
COL21A1-202ENST00000370817 SPG7Q9UQ90 795 aa10.91□□□□□ -0.66
COL21A1-202ENST00000370817 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
COL21A1-202ENST00000370817 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
COL21A1-202ENST00000370817 AMOTQ4VCS5 1084 aa10.9□□□□□ -0.66
COL21A1-202ENST00000370817 DEFB132Q7Z7B7 95 aa10.9□□□□□ -0.66
COL21A1-202ENST00000370817 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
COL21A1-202ENST00000370817 TJP1Q07157 1748 aa10.89□□□□□ -0.67
COL21A1-202ENST00000370817 PLSCR1O15162 318 aa10.89□□□□□ -0.67
COL21A1-202ENST00000370817 PTGIRP43119 386 aa10.89□□□□□ -0.67
COL21A1-202ENST00000370817 PLEKHO1Q53GL0 409 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-202ENST00000370817 FOXD4L5Q5VV16 416 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-202ENST00000370817 IFNL2Q8IZJ0 200 aa10.89□□□□□ -0.67
COL21A1-202ENST00000370817 NANOS1Q8WY41 292 aaKnown RBP10.89□□□□□ -0.67
COL21A1-202ENST00000370817 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
COL21A1-202ENST00000370817 KDM3BQ7LBC6 1761 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
COL21A1-202ENST00000370817 BAG6P46379 1132 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
COL21A1-202ENST00000370817 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 PCDHB9Q9Y5E1 797 aa10.88□□□□□ -0.67
COL21A1-202ENST00000370817 UBR3Q6ZT12 1888 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
COL21A1-202ENST00000370817 PRKAR2BP31323 418 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
COL21A1-202ENST00000370817 PHACTR3Q96KR7 559 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 CNTNAP3BQ96NU0 1288 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 CNTNAP3Q9BZ76 1288 aa10.87□□□□□ -0.67
COL21A1-202ENST00000370817 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 APBA3O96018 575 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
COL21A1-202ENST00000370817 ITGA6P23229 1130 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL21A1-202ENST00000370817 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
COL21A1-202ENST00000370817 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
COL21A1-202ENST00000370817 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 AKAP4Q5JQC9 854 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
COL21A1-202ENST00000370817 CEMIPQ8WUJ3 1361 aa10.86□□□□□ -0.67
COL21A1-202ENST00000370817 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
COL21A1-202ENST00000370817 DCAF5Q96JK2 942 aa10.85□□□□□ -0.67
COL21A1-202ENST00000370817 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-202ENST00000370817 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
COL21A1-202ENST00000370817 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
COL21A1-202ENST00000370817 ERVV-2B6SEH9 535 aa10.84□□□□□ -0.67
COL21A1-202ENST00000370817 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
COL21A1-202ENST00000370817 ANP32CO43423 234 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 GPR37L1O60883 481 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 VWA5B2Q8N398 1253 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 GAS2L2Q8NHY3 880 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 PIGBQ92521 554 aa10.83□□□□□ -0.68
COL21A1-202ENST00000370817 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
COL21A1-202ENST00000370817 C4AP0C0L4 1744 aa10.82□□□□□ -0.68
COL21A1-202ENST00000370817 CDC14CA4D256 554 aa10.82□□□□□ -0.68
COL21A1-202ENST00000370817 RNMTO43148 476 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms