RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 PTPDC1A2A3K4 754 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 TNNI3KQ59H18 835 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 ZNF530Q6P9A1 599 aaPredicted RBP20.53■□□□□ 0.88
CHUK-201ENST00000370397 FPGT-TNNI3KV9GXZ4 949 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 ZNF771Q7L3S4 317 aaPredicted RBP20.53■□□□□ 0.88
CHUK-201ENST00000370397 FILIP1Q7Z7B0 1213 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 ANO10Q9NW15 660 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 TMEM51Q9NW97 253 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
CHUK-201ENST00000370397 TEFQ10587 303 aa20.52■□□□□ 0.88
CHUK-201ENST00000370397 HAUS7Q99871 368 aa20.52■□□□□ 0.88
CHUK-201ENST00000370397 BCL11BQ9C0K0 894 aaPredicted RBP20.52■□□□□ 0.88
CHUK-201ENST00000370397 PCDHA7Q9UN72 937 aa20.52■□□□□ 0.88
CHUK-201ENST00000370397 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
CHUK-201ENST00000370397 KDM4FA0A1W2PPD8 638 aa20.52■□□□□ 0.88
CHUK-201ENST00000370397 GCKRQ14397 625 aa20.52■□□□□ 0.87
CHUK-201ENST00000370397 DPCR1Q3MIW9 517 aa20.52■□□□□ 0.87
CHUK-201ENST00000370397 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.87
CHUK-201ENST00000370397 THEMISQ8N1K5 641 aaPredicted RBP20.51■□□□□ 0.87
CHUK-201ENST00000370397 NUP188Q5SRE5 1749 aa20.51■□□□□ 0.87
CHUK-201ENST00000370397 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
CHUK-201ENST00000370397 H3BQV1 296 aa20.51■□□□□ 0.87
CHUK-201ENST00000370397 ZRANB2O95218 330 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHUK-201ENST00000370397 IFFO2Q5TF58 517 aa20.51■□□□□ 0.87
CHUK-201ENST00000370397 FBXL16Q8N461 479 aa20.51■□□□□ 0.87
CHUK-201ENST00000370397 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 PSDA5PKW4 1024 aaPredicted RBP20.5■□□□□ 0.87
CHUK-201ENST00000370397 EVCP57679 992 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 GSDMDP57764 484 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 MCMDC2Q4G0Z9 681 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 TRPM3Q9HCF6 1732 aaPredicted RBP20.5■□□□□ 0.87
CHUK-201ENST00000370397 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
CHUK-201ENST00000370397 APOBRQ0VD83 1088 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 UBXN6Q9BZV1 441 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
CHUK-201ENST00000370397 A0A1W2PQ27 194 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 A0A1W2PQ64 194 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 A0A1W2PQD8 194 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 NDUFA8P51970 172 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 TFCP2Q12800 502 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 ERCC6LQ2NKX8 1250 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 KCNA6P17658 529 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 ADALQ6DHV7 355 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 XPO4Q9C0E2 1151 aaKnown RBP20.49■□□□□ 0.87
CHUK-201ENST00000370397 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
CHUK-201ENST00000370397 FAM193AP78312 1265 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 TRIM65Q6PJ69 517 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 FSIP1Q8NA03 581 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 NCOA5Q9HCD5 579 aaKnown RBP20.48■□□□□ 0.87
CHUK-201ENST00000370397 TMX1Q9H3N1 280 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
CHUK-201ENST00000370397 KIF2AO00139 706 aaPredicted RBP20.48■□□□□ 0.87
CHUK-201ENST00000370397 PDIA3P30101 505 aaKnown RBP20.48■□□□□ 0.87
CHUK-201ENST00000370397 CLCN6P51797 869 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 CASP7P55210 303 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 CEP57L1Q8IYX8 460 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 LINC00301Q8NCQ3 95 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 KIAA1468Q9P260 1216 aa20.48■□□□□ 0.87
CHUK-201ENST00000370397 PLA2G4AP47712 749 aa20.47■□□□□ 0.87
CHUK-201ENST00000370397 DBNDD2Q9BQY9 259 aa20.47■□□□□ 0.87
CHUK-201ENST00000370397 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
CHUK-201ENST00000370397 AMOTQ4VCS5 1084 aa20.47■□□□□ 0.87
CHUK-201ENST00000370397 FOXP2O15409 715 aa20.47■□□□□ 0.87
CHUK-201ENST00000370397 KINO60870 393 aaKnown RBP20.47■□□□□ 0.87
CHUK-201ENST00000370397 PLEKHO1Q53GL0 409 aaPredicted RBP20.46■□□□□ 0.87
CHUK-201ENST00000370397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
CHUK-201ENST00000370397 MRPS27Q92552 414 aaKnown RBP20.46■□□□□ 0.87
CHUK-201ENST00000370397 BECN2A8MW95 431 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 TULP2O00295 520 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 ZBTB22O15209 634 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 CCDC73Q6ZRK6 1079 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
CHUK-201ENST00000370397 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
CHUK-201ENST00000370397 A0A1B0GVL5 298 aa20.45■□□□□ 0.86
CHUK-201ENST00000370397 HMGB1P09429 215 aaKnown RBP20.45■□□□□ 0.86
CHUK-201ENST00000370397 CYP2C19P33261 490 aa20.45■□□□□ 0.86
CHUK-201ENST00000370397 ZNF274Q96GC6 653 aaPredicted RBP20.45■□□□□ 0.86
CHUK-201ENST00000370397 METTL22Q9BUU2 404 aaPredicted RBP20.45■□□□□ 0.86
CHUK-201ENST00000370397 DSCC1Q9BVC3 393 aa20.45■□□□□ 0.86
CHUK-201ENST00000370397 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
CHUK-201ENST00000370397 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
CHUK-201ENST00000370397 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
CHUK-201ENST00000370397 SYT10Q6XYQ8 523 aa20.45■□□□□ 0.86
CHUK-201ENST00000370397 MYH7P12883 1935 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.44■□□□□ 0.86
CHUK-201ENST00000370397 E7EWF7 191 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 PNMA6AP0CW24 399 aaPredicted RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 CCT2P78371 535 aaKnown RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 DDX46Q7L014 1031 aaKnown RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 CCDC150Q8NCX0 1101 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 IFNKQ9P0W0 207 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 FOSBP53539 338 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 AIMP1Q12904 312 aaKnown RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 TMEM139Q8IV31 216 aa20.44■□□□□ 0.86
CHUK-201ENST00000370397 ZNF396Q96N95 335 aaPredicted RBP20.44■□□□□ 0.86
CHUK-201ENST00000370397 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms