RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 RAI14Q9P0K7 980 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 GOLGA8BA8MQT2 603 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 TRIM29Q14134 588 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 RRP12Q5JTH9 1297 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 MAP4K1Q92918 833 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 PNPLA6Q8IY17 1366 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 SPTLC2O15270 562 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 CAVIN2O95810 425 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 CCZ1BP86790 482 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 ZNF446Q9NWS9 450 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
PRPF38B-201ENST00000370021 SYKP43405 635 aa12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 IQCB1Q15051 598 aa12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 PROSER3Q2NL68 480 aa12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 CNNM3Q8NE01 707 aa12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 CLIC4Q9Y696 253 aa12.02□□□□□ -0.48
PRPF38B-201ENST00000370021 ZNF202O95125 648 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 HDGFP51858 240 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 TIMM10P62072 90 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 ZNF827Q17R98 1081 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 DNAJC21Q5F1R6 531 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 CCP110O43303 1012 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 E2F4Q16254 413 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
PRPF38B-201ENST00000370021 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 COBLO75128 1261 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 FAM69CQ0P6D2 419 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 TFCP2Q12800 502 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 DBNDD2Q9BQY9 259 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 CSB-PGBD3P0DP91 1061 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 TRDNQ13061 729 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 PNOCQ13519 176 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 RASSF8Q8NHQ8 419 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 GPIHBP1Q8IV16 184 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 PDE11AQ9HCR9 933 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 KIAA0232Q92628 1395 aa12.01□□□□□ -0.49
PRPF38B-201ENST00000370021 H0YHG0 523 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 GRM8O00222 908 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 CYP21A2P08686 494 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 MICU3Q86XE3 530 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 FANCLQ9NW38 375 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 TMEM232C9JQI7 657 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 PLA2G4AP47712 749 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 RESTQ13127 1097 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 ZNF569Q5MCW4 686 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
PRPF38B-201ENST00000370021 ELP1O95163 1332 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 CBFA2T2O43439 604 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 CAGE1Q8TC20 777 aa12□□□□□ -0.49
PRPF38B-201ENST00000370021 PCMTD1Q96MG8 357 aaPredicted RBP12□□□□□ -0.49
PRPF38B-201ENST00000370021 BAG1Q99933 345 aaPredicted RBP12□□□□□ -0.49
PRPF38B-201ENST00000370021 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
PRPF38B-201ENST00000370021 RIMBP3CA6NJZ7 1639 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 RIMBP3BA6NNM3 1639 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 RIMBP3Q9UFD9 1639 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 MYO1CO00159 1063 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 SYCP1Q15431 976 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 CLIC6Q96NY7 704 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 DEF6Q9H4E7 631 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 CYP2C19P33261 490 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 AFMP43652 599 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 DHX8Q14562 1220 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 MICALL1Q8N3F8 863 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 DPF2Q92785 391 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 SALL3Q9BXA9 1300 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 MCMDC2Q4G0Z9 681 aa11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 CPLX2Q6PUV4 134 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 DHX32Q7L7V1 743 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 FEZ2Q9UHY8 353 aaPredicted RBP11.99□□□□□ -0.49
PRPF38B-201ENST00000370021 A0A0G2JLW4 131 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 TAF5LO75529 589 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 SASH1O94885 1247 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 DNA2P51530 1060 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 TSPYL1Q9H0U9 437 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 FHOD1Q9Y613 1164 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 NEO1Q92859 1461 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 KIF5CO60282 957 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms