RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 CLIC4Q9Y696 253 aa14.32□□□□□ -0.12
PHGDH-201ENST00000369407 ALDH1L1O75891 902 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 URI1O94763 535 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-201ENST00000369407 CAPN2P17655 700 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 ALDH8A1Q9H2A2 487 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-201ENST00000369407 FANCGO15287 622 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 GSDMDP57764 484 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 KRT32Q14532 448 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 RIC3Q7Z5B4 369 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
PHGDH-201ENST00000369407 IGKV5-2P06315 115 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 FMR1NBQ8N0W7 255 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-201ENST00000369407 MRPS27Q92552 414 aaKnown RBP14.3□□□□□ -0.12
PHGDH-201ENST00000369407 NAT10Q9H0A0 1025 aaKnown RBP14.3□□□□□ -0.12
PHGDH-201ENST00000369407 ZNF609O15014 1411 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 FMN2Q9NZ56 1722 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 TSPOAP1O95153 1857 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 PFKFB2O60825 505 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 TSGA10IPQ3SY00 556 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 UBXN4Q92575 508 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 CARD6Q9BX69 1037 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 OSBPL5Q9H0X9 879 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-201ENST00000369407 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 LRRC37A3O60309 1634 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 NALCNQ8IZF0 1738 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 ADAMTS13Q76LX8 1427 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 GYS2P54840 703 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 ST5P78524 1137 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 DPF2Q92785 391 aa14.3□□□□□ -0.12
PHGDH-201ENST00000369407 ZNF396Q96N95 335 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-201ENST00000369407 SLC39A6Q13433 755 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 STK38Q15208 465 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 CCDC93Q567U6 631 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 CYP2C19P33261 490 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 TTLL5Q6EMB2 1281 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 MYD88Q99836 296 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
PHGDH-201ENST00000369407 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 MCMDC2Q4G0Z9 681 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 CALCOCO1Q9P1Z2 691 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 MARCKSP29966 332 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 TNNI3KQ59H18 835 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-201ENST00000369407 FPGT-TNNI3KV9GXZ4 949 aa14.28□□□□□ -0.12
PHGDH-201ENST00000369407 GOLIM4O00461 696 aa14.27□□□□□ -0.12
PHGDH-201ENST00000369407 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.12
PHGDH-201ENST00000369407 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.12
PHGDH-201ENST00000369407 KIF2AO00139 706 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-201ENST00000369407 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.13
PHGDH-201ENST00000369407 HOXB7P09629 217 aa14.27□□□□□ -0.13
PHGDH-201ENST00000369407 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
PHGDH-201ENST00000369407 HAND2P61296 217 aa14.27□□□□□ -0.13
PHGDH-201ENST00000369407 ETF1P62495 437 aaKnown RBP14.27□□□□□ -0.13
PHGDH-201ENST00000369407 FANCCQ00597 558 aa14.27□□□□□ -0.13
PHGDH-201ENST00000369407 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-201ENST00000369407 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
PHGDH-201ENST00000369407 CCDC150Q8NCX0 1101 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
PHGDH-201ENST00000369407 SASH3O75995 380 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 NCAPHQ15003 741 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
PHGDH-201ENST00000369407 ATP5JP18859 108 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 SMARCE1Q969G3 411 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 IMPACTQ9P2X3 320 aa14.26□□□□□ -0.13
PHGDH-201ENST00000369407 ZNF202O95125 648 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 SERPINC1P01008 464 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 C1orf141Q5JVX7 400 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 LINC00301Q8NCQ3 95 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 E7EWF7 191 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 EVCP57679 992 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 TEX35Q5T0J7 233 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 UBE3BQ7Z3V4 1068 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 XAGE3Q8WTP9 111 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 LLPHQ9BRT6 129 aaKnown RBP14.25□□□□□ -0.13
PHGDH-201ENST00000369407 CARMIL3Q8ND23 1372 aa14.25□□□□□ -0.13
PHGDH-201ENST00000369407 PSDA5PKW4 1024 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms