RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 EYA3Q99504 573 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 CEP126Q9P2H0 1117 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
CCNC-203ENST00000369220 FZD9O00144 591 aa12.78□□□□□ -0.36
CCNC-203ENST00000369220 ECE2O60344 883 aa12.78□□□□□ -0.36
CCNC-203ENST00000369220 RAD17O75943 681 aa12.78□□□□□ -0.36
CCNC-203ENST00000369220 TIMM10P62072 90 aa12.78□□□□□ -0.36
CCNC-203ENST00000369220 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCNC-203ENST00000369220 PUM3Q15397 648 aaKnown RBP12.78□□□□□ -0.36
CCNC-203ENST00000369220 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.36
CCNC-203ENST00000369220 UBE4AQ14139 1066 aa12.77□□□□□ -0.36
CCNC-203ENST00000369220 JAG2Q9Y219 1238 aa12.77□□□□□ -0.36
CCNC-203ENST00000369220 A0A1B0GUL7 405 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 HMMRO75330 724 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 ADORA1P30542 326 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 CXCL9Q07325 125 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 ATP2B3Q16720 1220 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
CCNC-203ENST00000369220 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.37
CCNC-203ENST00000369220 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
CCNC-203ENST00000369220 BCAMP50895 628 aa12.76□□□□□ -0.37
CCNC-203ENST00000369220 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
CCNC-203ENST00000369220 LPIN2Q92539 896 aa12.76□□□□□ -0.37
CCNC-203ENST00000369220 TLR7Q9NYK1 1049 aaKnown RBP12.76□□□□□ -0.37
CCNC-203ENST00000369220 G3V3G9 751 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 ZNF609O15014 1411 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
CCNC-203ENST00000369220 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
CCNC-203ENST00000369220 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 PSMD14O00487 310 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 TNNI3KQ59H18 835 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 C15orf52Q6ZUT6 534 aaKnown RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 FPGT-TNNI3KV9GXZ4 949 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 IGHDP01880 384 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 SLC5A1P13866 664 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 PHKA1P46020 1223 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
CCNC-203ENST00000369220 COA1Q9GZY4 146 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
CCNC-203ENST00000369220 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 XAGE2Q96GT9 111 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 DCTPP1Q9H773 170 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
CCNC-203ENST00000369220 COL1A1P02452 1464 aaPredicted RBP12.73□□□□□ -0.37
CCNC-203ENST00000369220 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 GTF2IP78347 998 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 CIAPIN1Q6FI81 312 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 FBXO33Q7Z6M2 555 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
CCNC-203ENST00000369220 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
CCNC-203ENST00000369220 IL1R1P14778 569 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 SCNN1DP51172 638 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
CCNC-203ENST00000369220 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 GPC2Q8N158 579 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 AKAP2Q9Y2D5 859 aa12.72□□□□□ -0.37
CCNC-203ENST00000369220 POTECB2RU33 542 aa12.71□□□□□ -0.37
CCNC-203ENST00000369220 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.37
CCNC-203ENST00000369220 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
CCNC-203ENST00000369220 AACSQ86V21 672 aa12.71□□□□□ -0.37
CCNC-203ENST00000369220 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
CCNC-203ENST00000369220 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.38
CCNC-203ENST00000369220 SCARF1Q14162 830 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 DACT2Q5SW24 774 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 ERC1Q8IUD2 1116 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 CERS5Q8N5B7 392 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.38
CCNC-203ENST00000369220 ZNF646O15015 1829 aaPredicted RBP12.71□□□□□ -0.38
CCNC-203ENST00000369220 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 AAMPQ13685 434 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 RASGRF1Q13972 1273 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
CCNC-203ENST00000369220 GPR108Q9NPR9 543 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
CCNC-203ENST00000369220 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
CCNC-203ENST00000369220 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
CCNC-203ENST00000369220 EPS15P42566 896 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms