RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 USP26Q9BXU7 913 aa28.94■■■□□ 2.22
SNX3-203ENST00000368979 CWC27Q6UX04 472 aaKnown RBP28.93■■■□□ 2.22
SNX3-203ENST00000368979 RUFY2Q8WXA3 655 aa28.93■■■□□ 2.22
SNX3-203ENST00000368979 BBOX1O75936 387 aa28.92■■■□□ 2.22
SNX3-203ENST00000368979 NPR1P16066 1061 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 ZAP70P43403 619 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 ANTXR1Q9H6X2 564 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 SNRKQ9NRH2 765 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 ZNF804BA4D1E1 1349 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 RAD50Q92878 1312 aa28.91■■■□□ 2.22
SNX3-203ENST00000368979 WTIPA6NIX2 430 aaPredicted RBP28.9■■■□□ 2.22
SNX3-203ENST00000368979 FKBP4Q02790 459 aaKnown RBP eCLIP28.9■■■□□ 2.22
SNX3-203ENST00000368979 NMIQ13287 307 aaPredicted RBP28.9■■■□□ 2.22
SNX3-203ENST00000368979 PI16Q6UXB8 463 aa28.89■■■□□ 2.22
SNX3-203ENST00000368979 TMC4Q7Z404 712 aa28.89■■■□□ 2.22
SNX3-203ENST00000368979 SLC51AQ86UW1 340 aa28.89■■■□□ 2.22
SNX3-203ENST00000368979 EPB41L2O43491 1005 aaKnown RBP28.89■■■□□ 2.21
SNX3-203ENST00000368979 KCNJ4P48050 445 aa28.89■■■□□ 2.21
SNX3-203ENST00000368979 BCAMP50895 628 aa28.89■■■□□ 2.21
SNX3-203ENST00000368979 FAM227BQ96M60 508 aa28.89■■■□□ 2.21
SNX3-203ENST00000368979 LTBP1Q14766 1721 aa28.88■■■□□ 2.21
SNX3-203ENST00000368979 XDHP47989 1333 aa28.88■■■□□ 2.21
SNX3-203ENST00000368979 MASTLQ96GX5 879 aa28.88■■■□□ 2.21
SNX3-203ENST00000368979 HMG20BQ9P0W2 317 aa28.88■■■□□ 2.21
SNX3-203ENST00000368979 IRS2Q9Y4H2 1338 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 A0A0D9SFI3 127 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 RASGRF1Q13972 1273 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 ANO2Q9NQ90 1003 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 LEMD3Q9Y2U8 911 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 C10orf71Q711Q0 1435 aa28.87■■■□□ 2.21
SNX3-203ENST00000368979 MED23Q9ULK4 1368 aa28.86■■■□□ 2.21
SNX3-203ENST00000368979 PPEF1O14829 653 aaPredicted RBP28.85■■■□□ 2.21
SNX3-203ENST00000368979 CYP2E1P05181 493 aaPredicted RBP28.85■■■□□ 2.21
SNX3-203ENST00000368979 KLRK1P26718 216 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 ALDH1B1P30837 517 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 GYG1P46976 350 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 CAVIN4Q5BKX8 364 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 SPATA5Q8NB90 893 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 FAM84BQ96KN1 310 aaPredicted RBP28.85■■■□□ 2.21
SNX3-203ENST00000368979 ANKIB1Q9P2G1 1089 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 DOCK2Q92608 1830 aa28.85■■■□□ 2.21
SNX3-203ENST00000368979 GPSM2P81274 684 aa28.84■■■□□ 2.21
SNX3-203ENST00000368979 TTF1Q15361 905 aaPredicted RBP28.84■■■□□ 2.21
SNX3-203ENST00000368979 FBXO33Q7Z6M2 555 aa28.84■■■□□ 2.21
SNX3-203ENST00000368979 C2CD5Q86YS7 1000 aa28.84■■■□□ 2.21
SNX3-203ENST00000368979 SP8Q8IXZ3 490 aa28.84■■■□□ 2.21
SNX3-203ENST00000368979 LSG1Q9H089 658 aaKnown RBP28.84■■■□□ 2.21
SNX3-203ENST00000368979 MYH7P12883 1935 aa28.83■■■□□ 2.21
SNX3-203ENST00000368979 CHGBP05060 677 aa28.83■■■□□ 2.21
SNX3-203ENST00000368979 STYK1Q6J9G0 422 aa28.83■■■□□ 2.21
SNX3-203ENST00000368979 KIF2CQ99661 725 aa28.83■■■□□ 2.21
SNX3-203ENST00000368979 GNL3LQ9NVN8 582 aaKnown RBP28.83■■■□□ 2.21
SNX3-203ENST00000368979 PODXL2Q9NZ53 605 aa28.83■■■□□ 2.21
SNX3-203ENST00000368979 COL1A1P02452 1464 aaPredicted RBP28.82■■■□□ 2.2
SNX3-203ENST00000368979 ZBTB22O15209 634 aa28.82■■■□□ 2.2
SNX3-203ENST00000368979 LRRFIP1Q32MZ4 808 aaKnown RBP28.82■■■□□ 2.2
SNX3-203ENST00000368979 DDRGK1Q96HY6 314 aa28.82■■■□□ 2.2
SNX3-203ENST00000368979 ATP6V0A2Q9Y487 856 aa28.82■■■□□ 2.2
SNX3-203ENST00000368979 H0YIN7 160 aa28.81■■■□□ 2.2
SNX3-203ENST00000368979 RNF113AO15541 343 aaKnown RBP28.81■■■□□ 2.2
SNX3-203ENST00000368979 C15orf52Q6ZUT6 534 aaKnown RBP28.81■■■□□ 2.2
SNX3-203ENST00000368979 IPO9Q96P70 1041 aaKnown RBP28.81■■■□□ 2.2
SNX3-203ENST00000368979 PIH1D3Q9NQM4 214 aaKnown RBP28.81■■■□□ 2.2
SNX3-203ENST00000368979 DLEC1Q9Y238 1755 aa28.81■■■□□ 2.2
SNX3-203ENST00000368979 ZFYP08048 801 aaPredicted RBP28.8■■■□□ 2.2
SNX3-203ENST00000368979 ATP2B4P23634 1241 aa28.8■■■□□ 2.2
SNX3-203ENST00000368979 ZMYM1Q5SVZ6 1142 aa28.8■■■□□ 2.2
SNX3-203ENST00000368979 KIAA1211Q6ZU35 1233 aa28.8■■■□□ 2.2
SNX3-203ENST00000368979 CACNA1SQ13698 1873 aa28.8■■■□□ 2.2
SNX3-203ENST00000368979 VPS37DQ86XT2 251 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 HELLSQ9NRZ9 838 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 NSFL1CQ9UNZ2 370 aaKnown RBP28.79■■■□□ 2.2
SNX3-203ENST00000368979 KIF13BQ9NQT8 1826 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 SEMA3EO15041 775 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 HIBADHP31937 336 aaKnown RBP28.79■■■□□ 2.2
SNX3-203ENST00000368979 MCMDC2Q4G0Z9 681 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 ZNF589Q86UQ0 364 aaPredicted RBP28.79■■■□□ 2.2
SNX3-203ENST00000368979 TXNRD3Q86VQ6 643 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 GGA1Q9UJY5 639 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 CCDC171Q6TFL3 1326 aa28.79■■■□□ 2.2
SNX3-203ENST00000368979 MYO5AQ9Y4I1 1855 aaKnown RBP28.78■■■□□ 2.2
SNX3-203ENST00000368979 MYH13Q9UKX3 1938 aa28.78■■■□□ 2.2
SNX3-203ENST00000368979 PDS5AQ29RF7 1337 aaKnown RBP28.78■■■□□ 2.2
SNX3-203ENST00000368979 ZNF622Q969S3 477 aaKnown RBP eCLIP28.78■■■□□ 2.2
SNX3-203ENST00000368979 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.78■■■□□ 2.2
SNX3-203ENST00000368979 DUOX1Q9NRD9 1551 aa28.77■■■□□ 2.2
SNX3-203ENST00000368979 UFL1O94874 794 aa28.77■■■□□ 2.2
SNX3-203ENST00000368979 SLFNL1Q499Z3 407 aa28.77■■■□□ 2.2
SNX3-203ENST00000368979 SEC62Q99442 399 aaKnown RBP28.77■■■□□ 2.2
SNX3-203ENST00000368979 DENND2AQ9ULE3 1009 aa28.77■■■□□ 2.2
SNX3-203ENST00000368979 MCCP23508 829 aa28.76■■■□□ 2.19
SNX3-203ENST00000368979 CHRNA5P30532 468 aa28.76■■■□□ 2.19
SNX3-203ENST00000368979 PTH1RQ03431 593 aa28.76■■■□□ 2.19
SNX3-203ENST00000368979 ZSCAN25Q6NSZ9 544 aa28.76■■■□□ 2.19
SNX3-203ENST00000368979 MTFR1LQ9H019 292 aa28.76■■■□□ 2.19
SNX3-203ENST00000368979 IQSEC3Q9UPP2 1182 aaPredicted RBP28.76■■■□□ 2.19
SNX3-203ENST00000368979 ZBTB7AO95365 584 aa28.75■■■□□ 2.19
SNX3-203ENST00000368979 HSPA4P34932 840 aa28.75■■■□□ 2.19
SNX3-203ENST00000368979 R3HDM1Q15032 1099 aaKnown RBP28.75■■■□□ 2.19
SNX3-203ENST00000368979 TBC1D16Q8TBP0 767 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms