RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 COL4A1P02462 1669 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 IGSF3O75054 1194 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
TPM3-212ENST00000368533 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 PROM2Q8N271 834 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
TPM3-212ENST00000368533 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 VGLL3A8MV65 326 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 ZNF609O15014 1411 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 CBX1P83916 185 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 TXNRD1Q16881 649 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 MPNDQ8N594 471 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 HAUS7Q99871 368 aa12.71□□□□□ -0.37
TPM3-212ENST00000368533 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
TPM3-212ENST00000368533 IGHMBP2P38935 993 aaKnown RBP12.71□□□□□ -0.38
TPM3-212ENST00000368533 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.38
TPM3-212ENST00000368533 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.38
TPM3-212ENST00000368533 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.38
TPM3-212ENST00000368533 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
TPM3-212ENST00000368533 CIAO1O76071 339 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 PDE8BO95263 885 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 MCAMP43121 646 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 BCAMP50895 628 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 NFIXQ14938 502 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
TPM3-212ENST00000368533 RBM8AQ9Y5S9 174 aaKnown RBP12.7□□□□□ -0.38
TPM3-212ENST00000368533 RXRBP28702 533 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 RUFY2Q8WXA3 655 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 SNX14Q9Y5W7 946 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
TPM3-212ENST00000368533 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
TPM3-212ENST00000368533 CHRNDQ07001 517 aa12.69□□□□□ -0.38
TPM3-212ENST00000368533 RAD50Q92878 1312 aa12.69□□□□□ -0.38
TPM3-212ENST00000368533 GPR101Q96P66 508 aaPredicted RBP12.69□□□□□ -0.38
TPM3-212ENST00000368533 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
TPM3-212ENST00000368533 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
TPM3-212ENST00000368533 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
TPM3-212ENST00000368533 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
TPM3-212ENST00000368533 CCDC171Q6TFL3 1326 aa12.69□□□□□ -0.38
TPM3-212ENST00000368533 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
TPM3-212ENST00000368533 KLRK1P26718 216 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 GYG1P46976 350 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
TPM3-212ENST00000368533 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
TPM3-212ENST00000368533 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
TPM3-212ENST00000368533 SPEF2Q9C093 1822 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 HSPA4P34932 840 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 KBTBD3Q8NAB2 608 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 PPP1R9BQ96SB3 815 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 MAP7D2Q96T17 732 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 LRRC2Q9BYS8 371 aa12.68□□□□□ -0.38
TPM3-212ENST00000368533 RGS17Q9UGC6 210 aaPredicted RBP12.68□□□□□ -0.38
TPM3-212ENST00000368533 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 MYH3P11055 1940 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
TPM3-212ENST00000368533 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
TPM3-212ENST00000368533 HAND2P61296 217 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
TPM3-212ENST00000368533 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
TPM3-212ENST00000368533 M0R2C6 588 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 DMTNQ08495 405 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
TPM3-212ENST00000368533 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
TPM3-212ENST00000368533 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 CYP2E1P05181 493 aaPredicted RBP12.66□□□□□ -0.38
TPM3-212ENST00000368533 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 LMBRD1Q9NUN5 540 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
TPM3-212ENST00000368533 GYS1P13807 737 aa12.65□□□□□ -0.38
TPM3-212ENST00000368533 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
TPM3-212ENST00000368533 CHST3Q7LGC8 479 aa12.65□□□□□ -0.38
TPM3-212ENST00000368533 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms