RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 YDJCA8MPS7 323 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 RAD17O75943 681 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 HSPA6P17066 643 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 EPHX2P34913 555 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
CD48-202ENST00000368046 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
CD48-202ENST00000368046 FRAT1Q92837 279 aaPredicted RBP12.39□□□□□ -0.43
CD48-202ENST00000368046 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
CD48-202ENST00000368046 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 TAF1P21675 1872 aa12.39□□□□□ -0.43
CD48-202ENST00000368046 COL4A1P02462 1669 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 COL4A5P29400 1685 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 WTIPA6NIX2 430 aaPredicted RBP12.38□□□□□ -0.43
CD48-202ENST00000368046 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
CD48-202ENST00000368046 CHRNDQ07001 517 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
CD48-202ENST00000368046 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 PODNQ7Z5L7 613 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
CD48-202ENST00000368046 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
CD48-202ENST00000368046 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
CD48-202ENST00000368046 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 ECE2O60344 883 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 EPS15P42566 896 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 SCNN1DP51172 638 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 DPF2Q92785 391 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
CD48-202ENST00000368046 PSMD14O00487 310 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 TAF5LO75529 589 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
CD48-202ENST00000368046 TRIM27P14373 513 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CD48-202ENST00000368046 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
CD48-202ENST00000368046 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
CD48-202ENST00000368046 LDHDQ86WU2 507 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 ANKRD44Q8N8A2 993 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
CD48-202ENST00000368046 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 LRRC37AA6NMS7 1700 aa12.36□□□□□ -0.43
CD48-202ENST00000368046 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 GNAI3P08754 354 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 VIL1P09327 827 aaKnown RBP12.35□□□□□ -0.43
CD48-202ENST00000368046 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
CD48-202ENST00000368046 KCNJ4P48050 445 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 APLP1P51693 650 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 TXNRD3Q86VQ6 643 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 PUS3Q9BZE2 481 aaKnown RBP12.35□□□□□ -0.43
CD48-202ENST00000368046 COA1Q9GZY4 146 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
CD48-202ENST00000368046 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
CD48-202ENST00000368046 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
CD48-202ENST00000368046 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
CD48-202ENST00000368046 H7C1D1 291 aa12.34□□□□□ -0.43
CD48-202ENST00000368046 PLIN1O60240 522 aa12.34□□□□□ -0.43
CD48-202ENST00000368046 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
CD48-202ENST00000368046 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
CD48-202ENST00000368046 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 SNAP23O00161 211 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 SEC24BO95487 1268 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 MEIS3Q99687 375 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
CD48-202ENST00000368046 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
CD48-202ENST00000368046 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
CD48-202ENST00000368046 TIE1P35590 1138 aa12.32□□□□□ -0.44
CD48-202ENST00000368046 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
CD48-202ENST00000368046 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
CD48-202ENST00000368046 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
CD48-202ENST00000368046 AGBL3Q8NEM8 1001 aa12.32□□□□□ -0.44
CD48-202ENST00000368046 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
CD48-202ENST00000368046 CD209Q9NNX6 404 aa12.32□□□□□ -0.44
CD48-202ENST00000368046 PGAP2Q9UHJ9 254 aa12.32□□□□□ -0.44
CD48-202ENST00000368046 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
CD48-202ENST00000368046 KLRK1P26718 216 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
CD48-202ENST00000368046 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 DZIP1LQ8IYY4 767 aaKnown RBP12.31□□□□□ -0.44
CD48-202ENST00000368046 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 SCN4AP35499 1836 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 MYH3P11055 1940 aa12.31□□□□□ -0.44
CD48-202ENST00000368046 EYA2O00167 538 aa12.3□□□□□ -0.44
CD48-202ENST00000368046 PDE8BO95263 885 aa12.3□□□□□ -0.44
CD48-202ENST00000368046 GNAI2P04899 355 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms