RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PLIN1O60240 522 aa29.99■■■□□ 2.39
PFDN2-201ENST00000368010 A0A1B0GUL6 1792 aa29.99■■■□□ 2.39
PFDN2-201ENST00000368010 ZNF609O15014 1411 aa29.98■■■□□ 2.39
PFDN2-201ENST00000368010 SNAP23O00161 211 aa29.98■■■□□ 2.39
PFDN2-201ENST00000368010 C15orf52Q6ZUT6 534 aaKnown RBP29.98■■■□□ 2.39
PFDN2-201ENST00000368010 TRPM4Q8TD43 1214 aa29.98■■■□□ 2.39
PFDN2-201ENST00000368010 PUS3Q9BZE2 481 aaKnown RBP29.98■■■□□ 2.39
PFDN2-201ENST00000368010 AGBL3Q8NEM8 1001 aa29.97■■■□□ 2.39
PFDN2-201ENST00000368010 MROH5Q6ZUA9 1318 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 ZKSCAN2Q63HK3 967 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 DNAJC5GQ8N7S2 189 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 MEIS3Q99687 375 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 RIPOR2Q9Y4F9 1068 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 PSME4Q14997 1843 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 IRS2Q9Y4H2 1338 aa29.96■■■□□ 2.39
PFDN2-201ENST00000368010 HIRAP54198 1017 aaPredicted RBP29.95■■■□□ 2.39
PFDN2-201ENST00000368010 SAMD7Q7Z3H4 446 aa29.95■■■□□ 2.39
PFDN2-201ENST00000368010 ZC3H15Q8WU90 426 aaKnown RBP29.95■■■□□ 2.39
PFDN2-201ENST00000368010 CREBZFQ9NS37 354 aa29.95■■■□□ 2.39
PFDN2-201ENST00000368010 TBC1D10BQ4KMP7 808 aaPredicted RBP29.94■■■□□ 2.38
PFDN2-201ENST00000368010 STRIP1Q5VSL9 837 aa29.94■■■□□ 2.38
PFDN2-201ENST00000368010 FBXW7Q969H0 707 aa29.94■■■□□ 2.38
PFDN2-201ENST00000368010 LRRFIP2Q9Y608 721 aaKnown RBP29.94■■■□□ 2.38
PFDN2-201ENST00000368010 CEP350Q5VT06 3117 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 DACT2Q5SW24 774 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 ZNF804AQ7Z570 1209 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 KLHDC4Q8TBB5 520 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 CLUAP1Q96AJ1 413 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 CD209Q9NNX6 404 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 PGAP2Q9UHJ9 254 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 TNNQ9UQP3 1299 aa29.93■■■□□ 2.38
PFDN2-201ENST00000368010 GNAI3P08754 354 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 UBE4AQ14139 1066 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 LRRC24Q50LG9 513 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 KLRG1Q96E93 195 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 GMLQ99445 158 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 MYO3BQ8WXR4 1341 aa29.92■■■□□ 2.38
PFDN2-201ENST00000368010 USP17L8P0C7I0 530 aa29.91■■■□□ 2.38
PFDN2-201ENST00000368010 RFX5P48382 616 aaPredicted RBP29.91■■■□□ 2.38
PFDN2-201ENST00000368010 METTL24Q5JXM2 366 aa29.91■■■□□ 2.38
PFDN2-201ENST00000368010 RBM26Q5T8P6 1007 aaKnown RBP29.91■■■□□ 2.38
PFDN2-201ENST00000368010 TMEM88BA6NKF7 163 aa29.9■■■□□ 2.38
PFDN2-201ENST00000368010 ZNF280AP59817 542 aaPredicted RBP29.9■■■□□ 2.38
PFDN2-201ENST00000368010 KIF4BQ2VIQ3 1234 aa29.9■■■□□ 2.38
PFDN2-201ENST00000368010 TTLL5Q6EMB2 1281 aa29.9■■■□□ 2.38
PFDN2-201ENST00000368010 EGFRP00533 1210 aa29.89■■■□□ 2.38
PFDN2-201ENST00000368010 GTF2IP78347 998 aa29.89■■■□□ 2.38
PFDN2-201ENST00000368010 PTPN12Q05209 780 aaKnown RBP29.88■■■□□ 2.37
PFDN2-201ENST00000368010 MXD3Q9BW11 206 aa29.88■■■□□ 2.37
PFDN2-201ENST00000368010 EYA2O00167 538 aa29.87■■■□□ 2.37
PFDN2-201ENST00000368010 TRAF5O00463 557 aa29.87■■■□□ 2.37
PFDN2-201ENST00000368010 IL1R1P14778 569 aa29.87■■■□□ 2.37
PFDN2-201ENST00000368010 GLIS2Q9BZE0 524 aaPredicted RBP29.87■■■□□ 2.37
PFDN2-201ENST00000368010 PDE8BO95263 885 aa29.86■■■□□ 2.37
PFDN2-201ENST00000368010 CDC37L1Q7L3B6 337 aa29.86■■■□□ 2.37
PFDN2-201ENST00000368010 FTSJ3Q8IY81 847 aaKnown RBP29.86■■■□□ 2.37
PFDN2-201ENST00000368010 TMEM57Q8N5G2 664 aa29.86■■■□□ 2.37
PFDN2-201ENST00000368010 ZNF646O15015 1829 aaPredicted RBP29.85■■■□□ 2.37
PFDN2-201ENST00000368010 OGFOD1Q8N543 542 aa29.85■■■□□ 2.37
PFDN2-201ENST00000368010 VGLL2Q8N8G2 317 aa29.85■■■□□ 2.37
PFDN2-201ENST00000368010 MYOZ2Q9NPC6 264 aa29.85■■■□□ 2.37
PFDN2-201ENST00000368010 FBXO3Q9UK99 471 aa29.85■■■□□ 2.37
PFDN2-201ENST00000368010 FMR1Q06787 632 aaKnown RBP eCLIP29.84■■■□□ 2.37
PFDN2-201ENST00000368010 HIBADHP31937 336 aaKnown RBP29.83■■■□□ 2.37
PFDN2-201ENST00000368010 GYG1P46976 350 aa29.83■■■□□ 2.37
PFDN2-201ENST00000368010 DZIP1LQ8IYY4 767 aaKnown RBP29.83■■■□□ 2.37
PFDN2-201ENST00000368010 DCPSQ96C86 337 aaKnown RBP29.83■■■□□ 2.37
PFDN2-201ENST00000368010 CIAO1O76071 339 aa29.82■■■□□ 2.36
PFDN2-201ENST00000368010 GNAI2P04899 355 aa29.82■■■□□ 2.36
PFDN2-201ENST00000368010 MMP14P50281 582 aa29.82■■■□□ 2.36
PFDN2-201ENST00000368010 FAM84BQ96KN1 310 aaPredicted RBP29.82■■■□□ 2.36
PFDN2-201ENST00000368010 SIL1Q9H173 461 aa29.82■■■□□ 2.36
PFDN2-201ENST00000368010 PUM3Q15397 648 aaKnown RBP29.81■■■□□ 2.36
PFDN2-201ENST00000368010 KIAA0825Q8IV33 1275 aa29.81■■■□□ 2.36
PFDN2-201ENST00000368010 GGA3Q9NZ52 723 aa29.81■■■□□ 2.36
PFDN2-201ENST00000368010 MKRN1Q9UHC7 482 aaKnown RBP29.81■■■□□ 2.36
PFDN2-201ENST00000368010 HDAC9Q9UKV0 1011 aa29.81■■■□□ 2.36
PFDN2-201ENST00000368010 MTX1Q13505 466 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 CAVIN4Q5BKX8 364 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 ATG9AQ7Z3C6 839 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 KRT26Q7Z3Y9 468 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 USP48Q86UV5 1035 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 VPS37DQ86XT2 251 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 TDRD7Q8NHU6 1098 aaKnown RBP29.8■■■□□ 2.36
PFDN2-201ENST00000368010 COPRSQ9NQ92 184 aa29.8■■■□□ 2.36
PFDN2-201ENST00000368010 SRGAP3O43295 1099 aa29.79■■■□□ 2.36
PFDN2-201ENST00000368010 SASH1O94885 1247 aa29.79■■■□□ 2.36
PFDN2-201ENST00000368010 IFIT1P09914 478 aaKnown RBP29.79■■■□□ 2.36
PFDN2-201ENST00000368010 SCARF1Q14162 830 aa29.79■■■□□ 2.36
PFDN2-201ENST00000368010 JMYQ8N9B5 988 aa29.79■■■□□ 2.36
PFDN2-201ENST00000368010 ABT1Q9ULW3 272 aaKnown RBP29.79■■■□□ 2.36
PFDN2-201ENST00000368010 CNTNAP1P78357 1384 aa29.78■■■□□ 2.36
PFDN2-201ENST00000368010 ASTN2O75129 1339 aaPredicted RBP29.78■■■□□ 2.36
PFDN2-201ENST00000368010 FKBP1AP62942 108 aaKnown RBP29.78■■■□□ 2.36
PFDN2-201ENST00000368010 CERS5Q8N5B7 392 aa29.78■■■□□ 2.36
PFDN2-201ENST00000368010 PA2G4Q9UQ80 394 aaKnown RBP29.78■■■□□ 2.36
PFDN2-201ENST00000368010 FAM205AQ6ZU69 1335 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 CELF2O95319 508 aaKnown RBP29.77■■■□□ 2.36
PFDN2-201ENST00000368010 FGFR2P21802 821 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 IL15P40933 162 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms