RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TMEM106CQ9BVX2 250 aa19.3■□□□□ 0.68
VAMP4-202ENST00000367740 EFCC1Q9HA90 598 aa19.3■□□□□ 0.68
VAMP4-202ENST00000367740 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
VAMP4-202ENST00000367740 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
VAMP4-202ENST00000367740 INHBEP58166 350 aa19.29■□□□□ 0.68
VAMP4-202ENST00000367740 FZD1Q9UP38 647 aa19.29■□□□□ 0.68
VAMP4-202ENST00000367740 PPP2R1AP30153 589 aa19.28■□□□□ 0.68
VAMP4-202ENST00000367740 CRHR2Q13324 411 aa19.28■□□□□ 0.68
VAMP4-202ENST00000367740 ISCA1Q9BUE6 129 aa19.28■□□□□ 0.68
VAMP4-202ENST00000367740 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
VAMP4-202ENST00000367740 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 SASH1O94885 1247 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 ZBTB48P10074 688 aaPredicted RBP19.27■□□□□ 0.68
VAMP4-202ENST00000367740 NFE2L2Q16236 605 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
VAMP4-202ENST00000367740 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 SEC31BQ9NQW1 1179 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 RBM27Q9P2N5 1060 aaKnown RBP19.27■□□□□ 0.68
VAMP4-202ENST00000367740 ECM29Q5VYK3 1845 aa19.27■□□□□ 0.68
VAMP4-202ENST00000367740 SPEF2Q9C093 1822 aa19.26■□□□□ 0.67
VAMP4-202ENST00000367740 PODNQ7Z5L7 613 aa19.26■□□□□ 0.67
VAMP4-202ENST00000367740 WNK4Q96J92 1243 aa19.26■□□□□ 0.67
VAMP4-202ENST00000367740 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
VAMP4-202ENST00000367740 COL1A1P02452 1464 aaPredicted RBP19.26■□□□□ 0.67
VAMP4-202ENST00000367740 OTOFQ9HC10 1997 aa19.26■□□□□ 0.67
VAMP4-202ENST00000367740 ATP5J2-PTCD1G3V325 749 aa19.25■□□□□ 0.67
VAMP4-202ENST00000367740 IRS4O14654 1257 aaPredicted RBP19.25■□□□□ 0.67
VAMP4-202ENST00000367740 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
VAMP4-202ENST00000367740 ZSWIM8A7E2V4 1837 aa19.25■□□□□ 0.67
VAMP4-202ENST00000367740 NEFMP07197 916 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 SP3Q02447 781 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 DACT2Q5SW24 774 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 APOBEC3FQ8IUX4 373 aaKnown RBP19.24■□□□□ 0.67
VAMP4-202ENST00000367740 PLBD2Q8NHP8 589 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 SLC10A4Q96EP9 437 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 UNC80Q8N2C7 3258 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 XDHP47989 1333 aa19.24■□□□□ 0.67
VAMP4-202ENST00000367740 MAP3K11Q16584 847 aa19.23■□□□□ 0.67
VAMP4-202ENST00000367740 SLC9C1Q4G0N8 1177 aa19.23■□□□□ 0.67
VAMP4-202ENST00000367740 OGFOD1Q8N543 542 aa19.23■□□□□ 0.67
VAMP4-202ENST00000367740 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
VAMP4-202ENST00000367740 PTCH2Q9Y6C5 1203 aa19.23■□□□□ 0.67
VAMP4-202ENST00000367740 SLC4A8Q2Y0W8 1093 aa19.22■□□□□ 0.67
VAMP4-202ENST00000367740 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
VAMP4-202ENST00000367740 GJA5P36382 358 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 NBPF11Q86T75 865 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 PTPN18Q99952 460 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 PRO3102Q9H379 93 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 MYO3BQ8WXR4 1341 aa19.21■□□□□ 0.67
VAMP4-202ENST00000367740 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
VAMP4-202ENST00000367740 MYCP01106 439 aaPredicted RBP19.19■□□□□ 0.66
VAMP4-202ENST00000367740 ATP2B4P23634 1241 aa19.19■□□□□ 0.66
VAMP4-202ENST00000367740 OTUD7BQ6GQQ9 843 aa19.19■□□□□ 0.66
VAMP4-202ENST00000367740 ANKRD13DQ6ZTN6 518 aa19.19■□□□□ 0.66
VAMP4-202ENST00000367740 KRT24Q2M2I5 525 aa19.18■□□□□ 0.66
VAMP4-202ENST00000367740 STRIP1Q5VSL9 837 aa19.18■□□□□ 0.66
VAMP4-202ENST00000367740 FBXW7Q969H0 707 aa19.18■□□□□ 0.66
VAMP4-202ENST00000367740 DEFB129Q9H1M3 183 aa19.18■□□□□ 0.66
VAMP4-202ENST00000367740 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
VAMP4-202ENST00000367740 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
VAMP4-202ENST00000367740 NPM3O75607 178 aaKnown RBP19.17■□□□□ 0.66
VAMP4-202ENST00000367740 TRIM28Q13263 835 aaKnown RBP19.17■□□□□ 0.66
VAMP4-202ENST00000367740 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
VAMP4-202ENST00000367740 MNX1P50219 401 aaPredicted RBP19.16■□□□□ 0.66
VAMP4-202ENST00000367740 MMP14P50281 582 aa19.16■□□□□ 0.66
VAMP4-202ENST00000367740 CCDC152Q4G0S7 254 aa19.16■□□□□ 0.66
VAMP4-202ENST00000367740 ZBTB38Q8NAP3 1195 aaPredicted RBP19.16■□□□□ 0.66
VAMP4-202ENST00000367740 SH3TC2Q8TF17 1288 aa19.16■□□□□ 0.66
VAMP4-202ENST00000367740 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
VAMP4-202ENST00000367740 MYH3P11055 1940 aa19.15■□□□□ 0.66
VAMP4-202ENST00000367740 UNCXA6NJT0 531 aa19.15■□□□□ 0.66
VAMP4-202ENST00000367740 PPP1R12BO60237 982 aaPredicted RBP19.15■□□□□ 0.66
VAMP4-202ENST00000367740 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
VAMP4-202ENST00000367740 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
VAMP4-202ENST00000367740 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
VAMP4-202ENST00000367740 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
VAMP4-202ENST00000367740 DPF3Q92784 378 aa19.14■□□□□ 0.65
VAMP4-202ENST00000367740 SOX1O00570 391 aaPredicted RBP19.13■□□□□ 0.65
VAMP4-202ENST00000367740 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
VAMP4-202ENST00000367740 COA1Q9GZY4 146 aa19.13■□□□□ 0.65
VAMP4-202ENST00000367740 PPP2R3BQ9Y5P8 575 aa19.13■□□□□ 0.65
VAMP4-202ENST00000367740 ARHGEF6Q15052 776 aa19.12■□□□□ 0.65
VAMP4-202ENST00000367740 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
VAMP4-202ENST00000367740 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
VAMP4-202ENST00000367740 ZNF804BA4D1E1 1349 aa19.11■□□□□ 0.65
VAMP4-202ENST00000367740 PDE8AO60658 829 aa19.11■□□□□ 0.65
VAMP4-202ENST00000367740 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
VAMP4-202ENST00000367740 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
VAMP4-202ENST00000367740 USP2O75604 605 aaPredicted RBP19.1■□□□□ 0.65
VAMP4-202ENST00000367740 IREB2P48200 963 aaKnown RBP19.1■□□□□ 0.65
VAMP4-202ENST00000367740 CCT4P50991 539 aaKnown RBP19.1■□□□□ 0.65
VAMP4-202ENST00000367740 TAF1CQ15572 869 aaPredicted RBP19.1■□□□□ 0.65
VAMP4-202ENST00000367740 NBPF12Q5TAG4 269 aaPredicted RBP19.1■□□□□ 0.65
VAMP4-202ENST00000367740 TTLL5Q6EMB2 1281 aa19.1■□□□□ 0.65
VAMP4-202ENST00000367740 UBE2Q1Q7Z7E8 422 aa19.1■□□□□ 0.65
VAMP4-202ENST00000367740 ANKRD13AQ8IZ07 590 aa19.1■□□□□ 0.65
VAMP4-202ENST00000367740 BRI3BPQ8WY22 251 aa19.1■□□□□ 0.65
VAMP4-202ENST00000367740 LRCH3Q96II8 777 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms