RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
CD46-208ENST00000367042 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 NEURL1BA8MQ27 555 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 SERPINC1P01008 464 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 MARCKSP29966 332 aaPredicted RBP9.54□□□□□ -0.88
CD46-208ENST00000367042 IQCB1Q15051 598 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 NSUN7Q8NE18 718 aaKnown RBP9.54□□□□□ -0.88
CD46-208ENST00000367042 MNS1Q8NEH6 495 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 KCNB2Q92953 911 aa9.54□□□□□ -0.88
CD46-208ENST00000367042 ANKARQ7Z5J8 1434 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 PDILTQ8N807 584 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 GJB4Q9NTQ9 266 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 TTLL5Q6EMB2 1281 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 FBXO38Q6PIJ6 1188 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 MRFAP1L1Q96HT8 127 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 XPO4Q9C0E2 1151 aaKnown RBP9.53□□□□□ -0.88
CD46-208ENST00000367042 GPHNQ9NQX3 736 aaPredicted RBP9.53□□□□□ -0.88
CD46-208ENST00000367042 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
CD46-208ENST00000367042 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
CD46-208ENST00000367042 DPCR1Q3MIW9 517 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 STOX1Q6ZVD7 989 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 KCNH5Q8NCM2 988 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 PCDHA7Q9UN72 937 aa9.53□□□□□ -0.88
CD46-208ENST00000367042 POLR3GO15318 223 aaPredicted RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 APPP05067 770 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 IFIT1P09914 478 aaKnown RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 ATP5JP18859 108 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 NDUFA8P51970 172 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 RALYLQ86SE5 291 aaKnown RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 DDX41Q9UJV9 622 aaKnown RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 GOLGA8BA8MQT2 603 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 NPHP4O75161 1426 aaPredicted RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 GCP02774 474 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 GSDMDP57764 484 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 FAM208AQ9UK61 1670 aaKnown RBP9.52□□□□□ -0.89
CD46-208ENST00000367042 MED23Q9ULK4 1368 aa9.52□□□□□ -0.89
CD46-208ENST00000367042 RXRAP19793 462 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 ARHGAP29Q52LW3 1261 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 ZNF790Q6PG37 636 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 DHX40Q8IX18 779 aaKnown RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 ORC3Q9UBD5 711 aaPredicted RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 CLIC4Q9Y696 253 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 KLF18A0A0U1RQI7 1052 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 E7EWF7 191 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 PFKFB2O60825 505 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 GOLGA8FQ08AF8 430 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 GOLGA8DPQ0D2H9 430 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 UBXN4Q92575 508 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 ZNF594Q96JF6 807 aaPredicted RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 RCOR1Q9UKL0 485 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 PTPN12Q05209 780 aaKnown RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 RBM43Q6ZSC3 357 aaKnown RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 KBTBD3Q8NAB2 608 aa9.51□□□□□ -0.89
CD46-208ENST00000367042 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
CD46-208ENST00000367042 SPTLC2O15270 562 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 CCZ1BP86790 482 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 CCZ1P86791 482 aaPredicted RBP9.5□□□□□ -0.89
CD46-208ENST00000367042 NAA16Q6N069 864 aaPredicted RBP9.5□□□□□ -0.89
CD46-208ENST00000367042 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
CD46-208ENST00000367042 ZNF609O15014 1411 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 CDC25BP30305 580 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
CD46-208ENST00000367042 CCDC66A2RUB6 948 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 ZBTB22O15209 634 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 HSPD1P10809 573 aaKnown RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 PDIA3P30101 505 aaKnown RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 SARM1Q6SZW1 724 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 UTP14AQ9BVJ6 771 aaKnown RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 KIAA1468Q9P260 1216 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 COL15A1P39059 1388 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 GABPB1Q06547 395 aaPredicted RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 CREBRFQ8IUR6 639 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 HAUS7Q99871 368 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 TOMM22Q9NS69 142 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 ARGLU1Q9NWB6 273 aaPredicted RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
CD46-208ENST00000367042 ZNF202O95125 648 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 ATP1A3P13637 1013 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 UBASH3AP57075 661 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 NFXL1Q6ZNB6 911 aa9.49□□□□□ -0.89
CD46-208ENST00000367042 CCDC150Q8NCX0 1101 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms