RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 GPHNQ9NQX3 736 aaPredicted RBP15.9■□□□□ 0.14
PRKN-205ENST00000366897 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
PRKN-205ENST00000366897 ERICH4A6NGS2 130 aa15.9■□□□□ 0.14
PRKN-205ENST00000366897 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
PRKN-205ENST00000366897 CCAR2Q8N163 923 aaKnown RBP15.9■□□□□ 0.14
PRKN-205ENST00000366897 MRFAP1L1Q96HT8 127 aa15.9■□□□□ 0.14
PRKN-205ENST00000366897 ERBB3P21860 1342 aa15.9■□□□□ 0.14
PRKN-205ENST00000366897 CDC25BP30305 580 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 GJB4Q9NTQ9 266 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
PRKN-205ENST00000366897 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 SARM1Q6SZW1 724 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 SMC2O95347 1197 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
PRKN-205ENST00000366897 PDIA6Q15084 440 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 DPCR1Q3MIW9 517 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 GORABQ5T7V8 394 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
PRKN-205ENST00000366897 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
PRKN-205ENST00000366897 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 KRT32Q14532 448 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 SYCP1Q15431 976 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 TSGA10IPQ3SY00 556 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 MORC2Q9Y6X9 1032 aaPredicted RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 SYT10Q6XYQ8 523 aa15.88■□□□□ 0.13
PRKN-205ENST00000366897 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
PRKN-205ENST00000366897 GCKRQ14397 625 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 POTEAQ6S8J7 498 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 ENGASEQ8NFI3 743 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.138e-6■■□□□ 14
PRKN-205ENST00000366897 FAM160A1Q05DH4 1040 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 TTLL5Q6EMB2 1281 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 KRT222Q8N1A0 295 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 SMARCC2Q8TAQ2 1214 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 NEUROD6Q96NK8 337 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 ANO10Q9NW15 660 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 ZNF446Q9NWS9 450 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 IFNKQ9P0W0 207 aa15.87■□□□□ 0.13
PRKN-205ENST00000366897 GOLIM4O00461 696 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 MCMDC2Q4G0Z9 681 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 XPO4Q9C0E2 1151 aaKnown RBP15.86■□□□□ 0.13
PRKN-205ENST00000366897 PCDHA7Q9UN72 937 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
PRKN-205ENST00000366897 PFKFB2O60825 505 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 ATP5JP18859 108 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 NDUFA8P51970 172 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
PRKN-205ENST00000366897 E4F1Q66K89 784 aaPredicted RBP15.86■□□□□ 0.13
PRKN-205ENST00000366897 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
PRKN-205ENST00000366897 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 TERF2Q15554 542 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 GOLGA8FQ08AF8 430 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 GOLGA8DPQ0D2H9 430 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 SLU7O95391 586 aaKnown RBP15.85■□□□□ 0.13
PRKN-205ENST00000366897 GABPB1Q06547 395 aaPredicted RBP15.85■□□□□ 0.13
PRKN-205ENST00000366897 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
PRKN-205ENST00000366897 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 CLIC4Q9Y696 253 aa15.85■□□□□ 0.13
PRKN-205ENST00000366897 CAVIN2O95810 425 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 HAND2P61296 217 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 ERO1AQ96HE7 468 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 TNS3Q68CZ2 1445 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 CTAGE5O15320 804 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 NEMFO60524 1076 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 LMOD1P29536 600 aaPredicted RBP15.84■□□□□ 0.13
PRKN-205ENST00000366897 TIMM10P62072 90 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
PRKN-205ENST00000366897 UTYO14607 1347 aa15.84■□□□□ 0.13
PRKN-205ENST00000366897 NAA16Q6N069 864 aaPredicted RBP15.83■□□□□ 0.13
PRKN-205ENST00000366897 FMR1NBQ8N0W7 255 aaPredicted RBP15.83■□□□□ 0.13
PRKN-205ENST00000366897 PPP1R13BQ96KQ4 1090 aa15.83■□□□□ 0.13
PRKN-205ENST00000366897 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
PRKN-205ENST00000366897 MARF1Q9Y4F3 1742 aaKnown RBP15.83■□□□□ 0.12
PRKN-205ENST00000366897 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.12
PRKN-205ENST00000366897 RFX5P48382 616 aaPredicted RBP15.83■□□□□ 0.12
PRKN-205ENST00000366897 CABLES1Q8TDN4 633 aa15.83■□□□□ 0.12
PRKN-205ENST00000366897 MRPS27Q92552 414 aaKnown RBP15.83■□□□□ 0.12
PRKN-205ENST00000366897 AFF2P51816 1311 aa15.82■□□□□ 0.12
PRKN-205ENST00000366897 ATP1A3P13637 1013 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms