RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 WWC3Q9ULE0 1092 aa7.58□□□□□ -1.2
CNIH4-201ENST00000366856 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 PDE2AO00408 941 aaPredicted RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 FMR1Q06787 632 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 DSC3Q14574 896 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 EAPPQ56P03 285 aaPredicted RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 GALNT12Q8IXK2 581 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
CNIH4-201ENST00000366856 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 PLVAPQ9BX97 442 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 DZANK1Q9NVP4 752 aa7.57□□□□□ -1.2
CNIH4-201ENST00000366856 A0A1W2PP55 124 aa7.56□□□□□ -1.2
CNIH4-201ENST00000366856 METTL12A8MUP2 240 aa7.56□□□□□ -1.2
CNIH4-201ENST00000366856 PIK3R2O00459 728 aa7.56□□□□□ -1.2
CNIH4-201ENST00000366856 HOXB4P17483 251 aaPredicted RBP7.56□□□□□ -1.2
CNIH4-201ENST00000366856 PEAR1Q5VY43 1037 aaPredicted RBP7.56□□□□□ -1.2
CNIH4-201ENST00000366856 POP1Q99575 1024 aaKnown RBP7.56□□□□□ -1.2
CNIH4-201ENST00000366856 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
CNIH4-201ENST00000366856 LIN7BQ9HAP6 207 aa7.56□□□□□ -1.2
CNIH4-201ENST00000366856 PTPRAP18433 802 aa7.55□□□□□ -1.2
CNIH4-201ENST00000366856 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.2
CNIH4-201ENST00000366856 LINC00114Q6XXX2 140 aa7.55□□□□□ -1.2
CNIH4-201ENST00000366856 TRIM11Q96F44 468 aa7.55□□□□□ -1.2
CNIH4-201ENST00000366856 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
CNIH4-201ENST00000366856 NID1P14543 1247 aa7.54□□□□□ -1.2
CNIH4-201ENST00000366856 CDC27P30260 824 aa7.54□□□□□ -1.2
CNIH4-201ENST00000366856 MSL1Q68DK7 614 aa7.54□□□□□ -1.2
CNIH4-201ENST00000366856 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
CNIH4-201ENST00000366856 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
CNIH4-201ENST00000366856 SPDYE3A6NKU9 549 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 RNF225M0QZC1 329 aaPredicted RBP7.53□□□□□ -1.2
CNIH4-201ENST00000366856 CABP4P57796 275 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 RAC1P63000 192 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 GRIK5Q16478 980 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 PRRT3Q5FWE3 981 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
CNIH4-201ENST00000366856 LINC01387J3KSC0 135 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 NFKBIEO00221 500 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 EPHA1P21709 976 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 TRIM28Q13263 835 aaKnown RBP7.52□□□□□ -1.21
CNIH4-201ENST00000366856 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 TMEM102Q8N9M5 508 aaPredicted RBP7.52□□□□□ -1.21
CNIH4-201ENST00000366856 NXPE3Q969Y0 559 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 CARD10Q9BWT7 1032 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
CNIH4-201ENST00000366856 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
CNIH4-201ENST00000366856 GRM2Q14416 872 aa7.51□□□□□ -1.21
CNIH4-201ENST00000366856 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
CNIH4-201ENST00000366856 FAM117BQ6P1L5 589 aa7.51□□□□□ -1.21
CNIH4-201ENST00000366856 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
CNIH4-201ENST00000366856 TTC9Q92623 222 aa7.51□□□□□ -1.21
CNIH4-201ENST00000366856 DUSP9Q99956 384 aaKnown RBP7.51□□□□□ -1.21
CNIH4-201ENST00000366856 GRIA4P48058 902 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 FCGRTP55899 365 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 TAGLNQ01995 201 aaKnown RBP7.5□□□□□ -1.21
CNIH4-201ENST00000366856 KIAA0319Q5VV43 1072 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 BSNDQ8WZ55 320 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 SPG7Q9UQ90 795 aa7.5□□□□□ -1.21
CNIH4-201ENST00000366856 A0A0A0MRY4 1105 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 PRPF40AO75400 957 aaKnown RBP7.49□□□□□ -1.21
CNIH4-201ENST00000366856 ERCC3P19447 782 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 BAG6P46379 1132 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 XPCQ01831 940 aaPredicted RBP7.49□□□□□ -1.21
CNIH4-201ENST00000366856 DTHD1Q6ZMT9 781 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 CCNJLQ8IV13 435 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 FAM161BQ96MY7 647 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 TCF12Q99081 682 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 BHLHE41Q9C0J9 482 aaPredicted RBP7.49□□□□□ -1.21
CNIH4-201ENST00000366856 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 TRAK1Q9UPV9 953 aa7.49□□□□□ -1.21
CNIH4-201ENST00000366856 A0A096LPE4 126 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 A0A1W2PPZ6 126 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 H3BRJ5 948 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 COL8A1P27658 744 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 IKBKEQ14164 716 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 GRIK4Q16099 956 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 AKAP2Q9Y2D5 859 aa7.48□□□□□ -1.21
CNIH4-201ENST00000366856 PSMD2Q13200 908 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 FMR1NBQ8N0W7 255 aaPredicted RBP7.47□□□□□ -1.21
CNIH4-201ENST00000366856 CACTIN-AS1Q8N1I8 211 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 FOXD4L4Q8WXT5 416 aaPredicted RBP7.47□□□□□ -1.21
CNIH4-201ENST00000366856 ADAM19Q9H013 955 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 PARP2Q9UGN5 583 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 SOX13Q9UN79 622 aa7.47□□□□□ -1.21
CNIH4-201ENST00000366856 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
CNIH4-201ENST00000366856 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms