RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 SNAP23O00161 211 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 TRAF5O00463 557 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
YBX3-203ENST00000366286 TBC1D10BQ4KMP7 808 aaPredicted RBP13.05□□□□□ -0.32
YBX3-203ENST00000366286 RSBN1LQ6PCB5 846 aaPredicted RBP13.05□□□□□ -0.32
YBX3-203ENST00000366286 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 COA1Q9GZY4 146 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
YBX3-203ENST00000366286 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 LDHAL6AQ6ZMR3 332 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 AGBL3Q8NEM8 1001 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
YBX3-203ENST00000366286 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
YBX3-203ENST00000366286 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
YBX3-203ENST00000366286 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
YBX3-203ENST00000366286 PLIN1O60240 522 aa13.03□□□□□ -0.32
YBX3-203ENST00000366286 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
YBX3-203ENST00000366286 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
YBX3-203ENST00000366286 GMLQ99445 158 aa13.03□□□□□ -0.32
YBX3-203ENST00000366286 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
YBX3-203ENST00000366286 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
YBX3-203ENST00000366286 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
YBX3-203ENST00000366286 C15orf52Q6ZUT6 534 aaKnown RBP13.02□□□□□ -0.33
YBX3-203ENST00000366286 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
YBX3-203ENST00000366286 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 CST9Q5W186 159 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 ABT1Q9ULW3 272 aaKnown RBP13.01□□□□□ -0.33
YBX3-203ENST00000366286 ASTN2O75129 1339 aaPredicted RBP13.01□□□□□ -0.33
YBX3-203ENST00000366286 ZBED9Q6R2W3 1325 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 MYO3BQ8WXR4 1341 aa13.01□□□□□ -0.33
YBX3-203ENST00000366286 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
YBX3-203ENST00000366286 BCAR3O75815 825 aa13□□□□□ -0.33
YBX3-203ENST00000366286 USP17L8P0C7I0 530 aa13□□□□□ -0.33
YBX3-203ENST00000366286 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
YBX3-203ENST00000366286 LRRC24Q50LG9 513 aa13□□□□□ -0.33
YBX3-203ENST00000366286 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
YBX3-203ENST00000366286 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
YBX3-203ENST00000366286 ZNF804AQ7Z570 1209 aa13□□□□□ -0.33
YBX3-203ENST00000366286 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
YBX3-203ENST00000366286 MYOZ2Q9NPC6 264 aa13□□□□□ -0.33
YBX3-203ENST00000366286 GGA3Q9NZ52 723 aa13□□□□□ -0.33
YBX3-203ENST00000366286 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
YBX3-203ENST00000366286 PCNTO95613 3336 aa13□□□□□ -0.33
YBX3-203ENST00000366286 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 ADM5C9JUS6 153 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 CELF2O95319 508 aaKnown RBP12.99□□□□□ -0.33
YBX3-203ENST00000366286 TRIM27P14373 513 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 IL1R1P14778 569 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 VEGFBP49765 207 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 GTF2IP78347 998 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 MEIS3Q99687 375 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
YBX3-203ENST00000366286 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
YBX3-203ENST00000366286 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
YBX3-203ENST00000366286 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
YBX3-203ENST00000366286 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
YBX3-203ENST00000366286 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
YBX3-203ENST00000366286 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
YBX3-203ENST00000366286 DCPSQ96C86 337 aaKnown RBP12.98□□□□□ -0.33
YBX3-203ENST00000366286 LRRFIP2Q9Y608 721 aaKnown RBP12.98□□□□□ -0.33
YBX3-203ENST00000366286 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
YBX3-203ENST00000366286 PAPPA2Q9BXP8 1791 aa12.98□□□□□ -0.33
YBX3-203ENST00000366286 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
YBX3-203ENST00000366286 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
YBX3-203ENST00000366286 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
YBX3-203ENST00000366286 GYG1P46976 350 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 SCARF1Q14162 830 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
YBX3-203ENST00000366286 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 CERS5Q8N5B7 392 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
YBX3-203ENST00000366286 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
YBX3-203ENST00000366286 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
YBX3-203ENST00000366286 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
YBX3-203ENST00000366286 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
YBX3-203ENST00000366286 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.33
YBX3-203ENST00000366286 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
YBX3-203ENST00000366286 EYA2O00167 538 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 WNT10BO00744 389 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 SASH1O94885 1247 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 PDE8BO95263 885 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
YBX3-203ENST00000366286 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
YBX3-203ENST00000366286 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms