RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 RAC1P63000 192 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 PRRT3Q5FWE3 981 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 MSL1Q68DK7 614 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 FAM117BQ6P1L5 589 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 WFDC8Q8IUA0 241 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 MAP4K3Q8IVH8 894 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 RASSF4Q9H2L5 321 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 NAGPAQ9UK23 515 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 SPG7Q9UQ90 795 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 STARD13Q9Y3M8 1113 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 PDE2AO00408 941 aaPredicted RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 LDHBP07195 334 aaKnown RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 CDC27P30260 824 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 AFF1P51825 1210 aaKnown RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 TRAPPC3LQ5T215 181 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 COL13A1Q5TAT6 717 aaPredicted RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 KIAA0319Q5VV43 1072 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 GDF6Q6KF10 455 aaPredicted RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 DNAJC14Q6Y2X3 702 aaPredicted RBP4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 DTWD1Q8N5C7 304 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 SRCIN1Q9C0H9 1055 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 EHD4Q9H223 541 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 LIN7BQ9HAP6 207 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 NPHS2Q9NP85 383 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 DZANK1Q9NVP4 752 aa4.65□□□□□ -1.67
RNU6-428P-201ENST00000362942 PRPF40AO75400 957 aaKnown RBP4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 POLR3DP05423 398 aaPredicted RBP4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 ARL4DP49703 201 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 ATP11AP98196 1134 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 TRIM28Q13263 835 aaKnown RBP4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 DDX54Q8TDD1 881 aaKnown RBP4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 ZKSCAN3Q9BRR0 538 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 ADAM19Q9H013 955 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 SUV39H2Q9H5I1 410 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 PPME1Q9Y570 386 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 CNTNAP5Q8WYK1 1306 aa4.64□□□□□ -1.67
RNU6-428P-201ENST00000362942 A0A1W2PP55 124 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 P4HBP07237 508 aaKnown RBP4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 XRCC5P13010 732 aaKnown RBP4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 NID1P14543 1247 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 SNRPNP63162 240 aaKnown RBP4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 XPCQ01831 940 aaPredicted RBP4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 USPL1Q5W0Q7 1092 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 LINC00114Q6XXX2 140 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 NPAS4Q8IUM7 802 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 IL22RA1Q8N6P7 574 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 ASAP3Q8TDY4 903 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 BSNDQ8WZ55 320 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 NXPE3Q969Y0 559 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 NACC1Q96RE7 527 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 PLVAPQ9BX97 442 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 BHLHE41Q9C0J9 482 aaPredicted RBP4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 LACRTQ9GZZ8 138 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 TRIM33Q9UPN9 1127 aa4.63□□□□□ -1.67
RNU6-428P-201ENST00000362942 NFKBIEO00221 500 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 SPATA31C1P0DKV0 1188 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 HOXB4P17483 251 aaPredicted RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 HNRNPUQ00839 825 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 PTPN12Q05209 780 aaKnown RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 GRIK5Q16478 980 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 PEAR1Q5VY43 1037 aaPredicted RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 PRPF40BQ6NWY9 871 aaKnown RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 C8orf86Q6ZUL3 223 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 CCNJLQ8IV13 435 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 DMRTC2Q8IXT2 367 aaPredicted RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 WNT8BQ93098 351 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 POP1Q99575 1024 aaKnown RBP4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 BCL2L13Q9BXK5 485 aa4.62□□□□□ -1.67
RNU6-428P-201ENST00000362942 A0A096LPE4 126 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 A0A1W2PPZ6 126 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 H3BRJ5 948 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 APBA3O96018 575 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 GNA15P30679 374 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 GSTT1P30711 240 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 PIP4K2BP78356 416 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 SUZ12Q15022 739 aaKnown RBP4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 DTHD1Q6ZMT9 781 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 KLHL23Q8NBE8 558 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 EPS8L3Q8TE67 593 aaKnown RBP4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 MRS2Q9HD23 443 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 OSGEPQ9NPF4 335 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 LATS2Q9NRM7 1088 aa4.61□□□□□ -1.67
RNU6-428P-201ENST00000362942 A0A0A0MRY4 1105 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 TMEM238LA0A1B0GVL6 79 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 ACPPP15309 386 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 ELNP15502 786 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 EIF4BP23588 611 aaKnown RBP4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 IRS1P35568 1242 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 IKBKEQ14164 716 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 GRM2Q14416 872 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 RPS26P11Q5JNZ5 115 aaPredicted RBP4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 FMR1NBQ8N0W7 255 aaPredicted RBP4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 TRIM11Q96F44 468 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 BCO2Q9BYV7 579 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 CLEC4MQ9H2X3 399 aaPredicted RBP4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 C12orf49Q9H741 205 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 PODXL2Q9NZ53 605 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 FAM8A1Q9UBU6 413 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms