RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TNNT1P13805 278 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 MTX1Q13505 466 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 MIGA1Q8NAN2 632 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 GUCY1B3Q02153 619 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 PKP1Q13835 747 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 BRF1Q92994 677 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 AFF2P51816 1311 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
CALD1-202ENST00000361901 ZNF589Q86UQ0 364 aaPredicted RBP10.78□□□□□ -0.68
CALD1-202ENST00000361901 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
CALD1-202ENST00000361901 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.68
CALD1-202ENST00000361901 ATP5JP18859 108 aa10.77□□□□□ -0.68
CALD1-202ENST00000361901 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.68
CALD1-202ENST00000361901 IMMTQ16891 758 aaKnown RBP10.77□□□□□ -0.68
CALD1-202ENST00000361901 ADCK5Q3MIX3 580 aa10.77□□□□□ -0.68
CALD1-202ENST00000361901 TPTE2Q6XPS3 522 aa10.77□□□□□ -0.68
CALD1-202ENST00000361901 RAD21O60216 631 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 FOXO4P98177 505 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 MAP3K12Q12852 859 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 ITPK1Q13572 414 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 TTLL11Q8NHH1 800 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
CALD1-202ENST00000361901 RGPD2P0DJD1 1756 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 RAD50Q92878 1312 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
CALD1-202ENST00000361901 ZKSCAN5Q9Y2L8 839 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 U2AF2P26368 475 aaKnown RBP eCLIP10.77□□□□□ -0.698e-8■□□□□ 10.4
CALD1-202ENST00000361901 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 GOLGA6L1Q8N7Z2 621 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 KBTBD3Q8NAB2 608 aa10.77□□□□□ -0.69
CALD1-202ENST00000361901 RPGRQ92834 1020 aaKnown RBP10.77□□□□□ -0.69
CALD1-202ENST00000361901 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 AOX1Q06278 1338 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 ZNF213O14771 459 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 RNF113AO15541 343 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 SYNE3Q6ZMZ3 975 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 NAPBQ9H115 298 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 C6orf229H3BNL8 230 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 GJB2P29033 226 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 IRX5P78411 483 aaPredicted RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 SF3A1Q15459 793 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 ZRSR1Q15695 479 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 TTLL5Q6EMB2 1281 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 NSFL1CQ9UNZ2 370 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 THRAP3Q9Y2W1 955 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 NWD1Q149M9 1564 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 SLC27A2O14975 620 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 BAG4O95429 457 aaKnown RBP10.76□□□□□ -0.69
CALD1-202ENST00000361901 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 HSPA4P34932 840 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 PHKA1P46020 1223 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 ANAPC15P60006 121 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 KRT32Q14532 448 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 MAGEB6Q8N7X4 407 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 ATP6V1DQ9Y5K8 247 aa10.76□□□□□ -0.69
CALD1-202ENST00000361901 BCAMP50895 628 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 PARP10Q53GL7 1025 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
CALD1-202ENST00000361901 NUP133Q8WUM0 1156 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 PIBF1Q8WXW3 757 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 KIF2CQ99661 725 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
CALD1-202ENST00000361901 ISCA1Q9BUE6 129 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 CTNNA3Q9UI47 895 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 Q6ZUG5 572 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 BCCIPQ9P287 314 aaKnown RBP eCLIP10.75□□□□□ -0.69
CALD1-202ENST00000361901 KIF1AQ12756 1690 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 SLIT3O75094 1523 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 ERICH2A1L162 156 aa10.75□□□□□ -0.69
CALD1-202ENST00000361901 LSG1Q9H089 658 aaKnown RBP10.75□□□□□ -0.69
CALD1-202ENST00000361901 GYG1P46976 350 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 ANKRD1Q15327 319 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 TFIP11Q9UBB9 837 aaKnown RBP10.74□□□□□ -0.69
CALD1-202ENST00000361901 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
CALD1-202ENST00000361901 WDR33Q9C0J8 1336 aaKnown RBP10.74□□□□□ -0.69
CALD1-202ENST00000361901 BICD2Q8TD16 824 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 NACAP1Q9BZK3 213 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
CALD1-202ENST00000361901 CYP7A1P22680 504 aa10.74□□□□□ -0.69
CALD1-202ENST00000361901 MYCNP04198 464 aaPredicted RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 PUM3Q15397 648 aaKnown RBP10.73□□□□□ -0.69
CALD1-202ENST00000361901 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms