RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
COL6A1-201ENST00000361866 VGLL3A8MV65 326 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL6A1-201ENST00000361866 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 CEP131Q9UPN4 1083 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
COL6A1-201ENST00000361866 PTCH1Q13635 1447 aa15.97■□□□□ 0.15
COL6A1-201ENST00000361866 G3V3G9 751 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 RNMTO43148 476 aaKnown RBP15.96■□□□□ 0.15
COL6A1-201ENST00000361866 FANCCQ00597 558 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 BEND3Q5T5X7 828 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 CDK5RAP3Q96JB5 506 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-201ENST00000361866 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-201ENST00000361866 PROSER3Q2NL68 480 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-201ENST00000361866 LRRC8AQ8IWT6 810 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 ADCY10Q96PN6 1610 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 ZNF202O95125 648 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 DHX58Q96C10 678 aa15.96■□□□□ 0.15
COL6A1-201ENST00000361866 KCNA6P17658 529 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-201ENST00000361866 SSH2Q76I76 1423 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 DDIT3P35638 169 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 MYL5Q02045 173 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 ZNF589Q86UQ0 364 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-201ENST00000361866 GBP3Q9H0R5 595 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 FAM135BQ49AJ0 1406 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 RNF113AO15541 343 aaKnown RBP15.95■□□□□ 0.14
COL6A1-201ENST00000361866 ATP2B3Q16720 1220 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 C10orf67Q8IYJ2 551 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 CAPN2P17655 700 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
COL6A1-201ENST00000361866 MYOM2P54296 1465 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 GOLGA6L9A6NEM1 432 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 IL15P40933 162 aaPredicted RBP15.94■□□□□ 0.14
COL6A1-201ENST00000361866 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
COL6A1-201ENST00000361866 MYL10Q9BUA6 226 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 RSPH14Q9UHP6 348 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 C11orf57Q6ZUT1 292 aaPredicted RBP15.94■□□□□ 0.14
COL6A1-201ENST00000361866 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 VPS18Q9P253 973 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 PHKBQ93100 1093 aa15.94■□□□□ 0.14
COL6A1-201ENST00000361866 GCP02774 474 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 MAP4K1Q92918 833 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 BAG1Q99933 345 aaPredicted RBP15.93■□□□□ 0.14
COL6A1-201ENST00000361866 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 DMTNQ08495 405 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 ZNF569Q5MCW4 686 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 PI4K2BQ8TCG2 481 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 A0A1B0GUL7 405 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 KIAA0754O94854 1291 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
COL6A1-201ENST00000361866 CCDC175P0C221 793 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 ATP2B2Q01814 1243 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 TRMT44Q8IYL2 757 aaKnown RBP15.92■□□□□ 0.14
COL6A1-201ENST00000361866 KBTBD3Q8NAB2 608 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 IP6K1Q92551 441 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 YEATS4O95619 227 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 NLRP5P59047 1200 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 PPP2R3AQ06190 1150 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 ZNF790Q6PG37 636 aa15.92■□□□□ 0.14
COL6A1-201ENST00000361866 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
COL6A1-201ENST00000361866 ANKRD18BA2A2Z9 1011 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 B4E1Z4 1266 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 GCKRQ14397 625 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 IL25Q9H293 177 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 GABPB1Q06547 395 aaPredicted RBP15.91■□□□□ 0.14
COL6A1-201ENST00000361866 GOLGA8FQ08AF8 430 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 GOLGA8DPQ0D2H9 430 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 GOLGA1Q92805 767 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 SRRTQ9BXP5 876 aaKnown RBP15.91■□□□□ 0.14
COL6A1-201ENST00000361866 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 CTAGE15A4D2H0 777 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 CTAGE8P0CG41 777 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 SCRN1Q12765 414 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 CTAGE6Q86UF2 777 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 CTAGE4Q8IX94 777 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
COL6A1-201ENST00000361866 STARD3NLO95772 234 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 WTAPQ15007 396 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 SPA17Q15506 151 aa15.9■□□□□ 0.14
COL6A1-201ENST00000361866 ODF2Q5BJF6 829 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms