RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 GUCA1BQ9UMX6 200 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.944e-9■□□□□ 9.9
CTNND1-204ENST00000361796 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 KRT23Q9C075 422 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 RIMBP2O15034 1052 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 UBXN1Q04323 297 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 SPECC1LQ69YQ0 1117 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 PAG1Q9NWQ8 432 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
CTNND1-204ENST00000361796 ATRIPQ8WXE1 791 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 TSNARE1Q96NA8 513 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 UIMC1Q96RL1 719 aa9.17□□□□□ -0.94
CTNND1-204ENST00000361796 GOLGA6L9A6NEM1 432 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 TFCP2Q12800 502 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 CCDC63Q8NA47 563 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 DYNC1I1O14576 645 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 MNAT1P51948 309 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 NAA16Q6N069 864 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-204ENST00000361796 MAGEB6P1A0A0J9YX57 407 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 LDHCP07864 332 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 POLD1P28340 1107 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 C8orf34Q49A92 452 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 CC2D2AQ9P2K1 1620 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 TYRO3Q06418 890 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 IQGAP2Q13576 1575 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 KCNG4Q8TDN1 519 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 VEZTQ9HBM0 779 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 VPS18Q9P253 973 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 SAP30BPQ9UHR5 308 aaKnown RBP9.16□□□□□ -0.94
CTNND1-204ENST00000361796 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 GRM8O00222 908 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 SEC24BO95487 1268 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 UQCRFS1P1P0C7P4 283 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 CYLC1P35663 651 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-204ENST00000361796 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
CTNND1-204ENST00000361796 SYT10Q6XYQ8 523 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 CCDC129Q6ZRS4 1044 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 CCDC155Q8N6L0 562 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 ESR2Q92731 530 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
CTNND1-204ENST00000361796 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTNND1-204ENST00000361796 FERP16591 822 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 ACTN2P35609 894 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 TNNI2P48788 182 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 CKAP4Q07065 602 aaKnown RBP9.15□□□□□ -0.94
CTNND1-204ENST00000361796 CCDC25Q86WR0 208 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 ZNF569Q5MCW4 686 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 KRT222Q8N1A0 295 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 SMARCC2Q8TAQ2 1214 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 FBF1Q8TES7 1133 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 CTAGE9A4FU28 777 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 KIF4AO95239 1232 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 GSTO1P78417 241 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 HDAC1Q13547 482 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-204ENST00000361796 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.94
CTNND1-204ENST00000361796 RLBP1P12271 317 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 ERMNQ8TAM6 284 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 SPTLC2O15270 562 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 KRT2P35908 639 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 CCT6AP40227 531 aaKnown RBP9.15□□□□□ -0.95
CTNND1-204ENST00000361796 IFI16Q16666 785 aaKnown RBP9.15□□□□□ -0.95
CTNND1-204ENST00000361796 SETDB2Q96T68 719 aa9.15□□□□□ -0.95
CTNND1-204ENST00000361796 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 CTAGE1Q96RT6 745 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 ARFGAP3Q9NP61 516 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 CTNND2Q9UQB3 1225 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 ZEB2O60315 1214 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 NBPF7P0C2Y1 421 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 MTHFSDQ2M296 383 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 GRIPAP1Q4V328 841 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 IQCGQ9H095 443 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 DCAF17Q5H9S7 520 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 CCDC160A6NGH7 325 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 ERCC3P19447 782 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 RNASE9P60153 205 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 MICALL1Q8N3F8 863 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 ZCRB1Q8TBF4 217 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 MRRFQ96E11 262 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
CTNND1-204ENST00000361796 MCM9Q9NXL9 1143 aa9.14□□□□□ -0.95
CTNND1-204ENST00000361796 ATP8B2P98198 1209 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 FAM160A1Q05DH4 1040 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 RAPGEF1Q13905 1077 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 CCDC6Q16204 474 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
CTNND1-204ENST00000361796 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
CTNND1-204ENST00000361796 PSMA7O14818 248 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms