RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 DNAJC21Q5F1R6 531 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 NUTM1Q86Y26 1132 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 ZKSCAN5Q9Y2L8 839 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 SH3BP1Q9Y3L3 701 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 ADGRB2O60241 1585 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 ARL10Q8N8L6 244 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 BECN2A8MW95 431 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 KIF1CO43896 1103 aaKnown RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 NAT10Q9H0A0 1025 aaKnown RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 LIMCH1Q9UPQ0 1083 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 LMBR1LQ6UX01 489 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
SIN3A-201ENST00000360439 NOL7Q9UMY1 257 aaKnown RBP11.47□□□□□ -0.57
SIN3A-201ENST00000360439 PPLO60437 1756 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 PNPLA6Q8IY17 1366 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 RBBP5Q15291 538 aaKnown RBP11.46□□□□□ -0.57
SIN3A-201ENST00000360439 IL17REQ8NFR9 667 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
SIN3A-201ENST00000360439 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 KRT32Q14532 448 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
SIN3A-201ENST00000360439 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
SIN3A-201ENST00000360439 GBP2P32456 591 aaPredicted RBP11.46□□□□□ -0.58
SIN3A-201ENST00000360439 UBE2HP62256 183 aa11.46□□□□□ -0.58
SIN3A-201ENST00000360439 MYRIPQ8NFW9 859 aa11.46□□□□□ -0.58
SIN3A-201ENST00000360439 CPLX1O14810 134 aa11.46□□□□□ -0.58
SIN3A-201ENST00000360439 KCNQ3O43525 872 aa11.46□□□□□ -0.58
SIN3A-201ENST00000360439 SLC3A2P08195 630 aaKnown RBP11.45□□□□□ -0.58
SIN3A-201ENST00000360439 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 HOMER1Q86YM7 354 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
SIN3A-201ENST00000360439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.589e-7■■■□□ 15.9
SIN3A-201ENST00000360439 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 MROH2AA6NES4 1674 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 GRM8O00222 908 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 KIAA0754O94854 1291 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
SIN3A-201ENST00000360439 GPR162Q16538 588 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 CCDC73Q6ZRK6 1079 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 CLEC17AQ6ZS10 378 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 MEIS3Q99687 375 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 GOLGA6L10A6NI86 522 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 FIBPO43427 364 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 CAND2O75155 1236 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 NACAP1Q9BZK3 213 aa11.45□□□□□ -0.58
SIN3A-201ENST00000360439 CHL1O00533 1208 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 ZSCAN25Q6NSZ9 544 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 GTF3C6Q969F1 213 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 ZC3H12CQ9C0D7 883 aaKnown RBP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 ZNF396Q96N95 335 aaPredicted RBP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 RUFY1Q96T51 708 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 NUP62CLQ9H1M0 184 aa11.44□□□□□ -0.58
SIN3A-201ENST00000360439 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 V9GYY5 206 aaPredicted RBP11.44□□□□□ -0.58
SIN3A-201ENST00000360439 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 H0YIN7 160 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 DDX11Q96FC9 970 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 DLC1Q96QB1 1528 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 CAVIN2O95810 425 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 LMBRD1Q9NUN5 540 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 RTL1A6NKG5 1358 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 ZSCAN22P10073 491 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 BMS1Q14692 1282 aaKnown RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 SF3A1Q15459 793 aaKnown RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 SCAND2PQ9GZW5 306 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 TNMDQ9H2S6 317 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 G3BP2Q9UN86 482 aaKnown RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 STX6O43752 255 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 NOLC1Q14978 699 aaKnown RBP eCLIP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 MAP3K11Q16584 847 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 TMCO3Q6UWJ1 677 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 KIAA1328Q86T90 577 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 HELBQ8NG08 1087 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-201ENST00000360439 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms