RNA–Protein interactions for RNA: ENST00000358572.9

TMA16-201, Transcript of translation machinery associated 16 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMA16, Length 1,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-201ENST00000358572 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
TMA16-201ENST00000358572 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.7■□□□□ 0.58
TMA16-201ENST00000358572 ANKRD1Q15327 319 aa18.7■□□□□ 0.58
TMA16-201ENST00000358572 ERFEQ4G0M1 354 aa18.7■□□□□ 0.58
TMA16-201ENST00000358572 SLC10A5Q5PT55 438 aa18.7■□□□□ 0.58
TMA16-201ENST00000358572 NEK1Q96PY6 1258 aa18.7■□□□□ 0.58
TMA16-201ENST00000358572 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
TMA16-201ENST00000358572 TPCN1Q9ULQ1 816 aa18.7■□□□□ 0.58
TMA16-201ENST00000358572 SCN7AQ01118 1682 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 AKAP11Q9UKA4 1901 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 UQCRFS1P1P0C7P4 283 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 PHKA1P46020 1223 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 ST3GAL1Q11201 340 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 SF3B3Q15393 1217 aaKnown RBP18.69■□□□□ 0.58
TMA16-201ENST00000358572 ME3Q16798 604 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 SMIM5Q71RC9 77 aa18.69■□□□□ 0.58
TMA16-201ENST00000358572 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
TMA16-201ENST00000358572 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 APPBP2Q92624 585 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 ARAP2Q8WZ64 1704 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 SLC5A1P13866 664 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 IGHMBP2P38935 993 aaKnown RBP18.68■□□□□ 0.58
TMA16-201ENST00000358572 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
TMA16-201ENST00000358572 LY75O60449 1722 aa18.67■□□□□ 0.58
TMA16-201ENST00000358572 GNPATO15228 680 aa18.67■□□□□ 0.58
TMA16-201ENST00000358572 FOXP2O15409 715 aa18.67■□□□□ 0.58
TMA16-201ENST00000358572 TTF1Q15361 905 aaPredicted RBP18.67■□□□□ 0.58
TMA16-201ENST00000358572 C3orf67Q6ZVT6 689 aa18.67■□□□□ 0.58
TMA16-201ENST00000358572 STOX1Q6ZVD7 989 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 CCDC83Q8IWF9 413 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.58
TMA16-201ENST00000358572 LMBRD1Q9NUN5 540 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
TMA16-201ENST00000358572 ADD2P35612 726 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 AMIGO3Q86WK7 504 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 TCEANC2Q96MN5 208 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 CDC5LQ99459 802 aaKnown RBP18.66■□□□□ 0.58
TMA16-201ENST00000358572 PIH1D3Q9NQM4 214 aaKnown RBP18.66■□□□□ 0.58
TMA16-201ENST00000358572 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
TMA16-201ENST00000358572 SMC3Q9UQE7 1217 aa18.66■□□□□ 0.58
TMA16-201ENST00000358572 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
TMA16-201ENST00000358572 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
TMA16-201ENST00000358572 SNAP23O00161 211 aa18.65■□□□□ 0.58
TMA16-201ENST00000358572 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
TMA16-201ENST00000358572 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
TMA16-201ENST00000358572 PUS7LQ9H0K6 701 aaKnown RBP18.65■□□□□ 0.58
TMA16-201ENST00000358572 GZF1Q9H116 711 aaPredicted RBP18.65■□□□□ 0.58
TMA16-201ENST00000358572 COL4A1P02462 1669 aa18.65■□□□□ 0.58
TMA16-201ENST00000358572 HMGB1P09429 215 aaKnown RBP18.64■□□□□ 0.58
TMA16-201ENST00000358572 CHRNDQ07001 517 aa18.64■□□□□ 0.58
TMA16-201ENST00000358572 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.58
TMA16-201ENST00000358572 NECAB1Q8N987 351 aa18.64■□□□□ 0.58
TMA16-201ENST00000358572 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.58
TMA16-201ENST00000358572 BCL11BQ9C0K0 894 aaPredicted RBP18.64■□□□□ 0.58
TMA16-201ENST00000358572 ZPR1O75312 459 aa18.64■□□□□ 0.57
TMA16-201ENST00000358572 UBE3CQ15386 1083 aa18.64■□□□□ 0.57
TMA16-201ENST00000358572 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
TMA16-201ENST00000358572 FOXD4L5Q5VV16 416 aaPredicted RBP18.64■□□□□ 0.57
TMA16-201ENST00000358572 FOXD4L4Q8WXT5 416 aaPredicted RBP18.64■□□□□ 0.57
TMA16-201ENST00000358572 SETDB2Q96T68 719 aa18.64■□□□□ 0.57
TMA16-201ENST00000358572 NYXQ9GZU5 481 aa18.64■□□□□ 0.57
TMA16-201ENST00000358572 A0A0G2JLW4 131 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 SYT1P21579 422 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 CHAMP1Q96JM3 812 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 TAF1LQ8IZX4 1826 aa18.63■□□□□ 0.57
TMA16-201ENST00000358572 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 DHX32Q7L7V1 743 aaKnown RBP18.62■□□□□ 0.57
TMA16-201ENST00000358572 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 FSD2A1L4K1 749 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 E7EWF7 191 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 GJB2P29033 226 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 EXOSC10Q01780 885 aaKnown RBP18.62■□□□□ 0.57
TMA16-201ENST00000358572 TTLL5Q6EMB2 1281 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 ANKRD18AQ8IVF6 992 aa18.62■□□□□ 0.57
TMA16-201ENST00000358572 QTRT2Q9H974 415 aaKnown RBP18.62■□□□□ 0.57
TMA16-201ENST00000358572 BSDC1Q9NW68 430 aaPredicted RBP18.62■□□□□ 0.57
TMA16-201ENST00000358572 TCRBV5S4A2TA0A5A2 114 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 GPAA1O43292 621 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 STX6O43752 255 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 Q6ZUG5 572 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
TMA16-201ENST00000358572 FGAP02671 866 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 ZSCAN22P10073 491 aaPredicted RBP18.61■□□□□ 0.57
TMA16-201ENST00000358572 GTF2E1P29083 439 aaPredicted RBP18.61■□□□□ 0.57
TMA16-201ENST00000358572 AGXT2Q9BYV1 514 aa18.61■□□□□ 0.57
TMA16-201ENST00000358572 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
TMA16-201ENST00000358572 MYH7P12883 1935 aa18.6■□□□□ 0.57
TMA16-201ENST00000358572 IDH1O75874 414 aaKnown RBP18.6■□□□□ 0.57
TMA16-201ENST00000358572 PDE6AP16499 860 aa18.6■□□□□ 0.57
TMA16-201ENST00000358572 BCAMP50895 628 aa18.6■□□□□ 0.57
TMA16-201ENST00000358572 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
TMA16-201ENST00000358572 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
TMA16-201ENST00000358572 LRRC4BQ9NT99 713 aa18.6■□□□□ 0.57
TMA16-201ENST00000358572 DDX49Q9Y6V7 483 aaKnown RBP18.6■□□□□ 0.57
TMA16-201ENST00000358572 ZNF532Q9HCE3 1301 aa18.59■□□□□ 0.57
TMA16-201ENST00000358572 TPTE2Q6XPS3 522 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms