RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 UBASH3AP57075 661 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 RESTQ13127 1097 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 GCKRQ14397 625 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 SPECC1Q5M775 1068 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 NOL10Q9BSC4 688 aaKnown RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 ELP1O95163 1332 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 TSPOAP1O95153 1857 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 KIF20AO95235 890 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 CAVIN2O95810 425 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 UTP14AQ9BVJ6 771 aaKnown RBP7.62□□□□□ -1.19
CSDE1-203ENST00000358528 GOLPH3LQ9H4A5 285 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 ADCY9O60503 1353 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 GCP02774 474 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC57Q2TAC2 916 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 DPCR1Q3MIW9 517 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC34Q96HJ3 373 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 ST7Q9NRC1 585 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 TMEM131LA2VDJ0 1609 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 CEP170BQ9Y4F5 1589 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-203ENST00000358528 NEURL1BA8MQ27 555 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 SYKP43405 635 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 NDUFA8P51970 172 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 GNG11P61952 73 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-203ENST00000358528 PCDHA7Q9UN72 937 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 PRC1O43663 620 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 PLA2G4DQ86XP0 818 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 NUP133Q8WUM0 1156 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 ERO1AQ96HE7 468 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 ORAI2Q96SN7 254 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 CLIC4Q9Y696 253 aa7.62□□□□□ -1.19
CSDE1-203ENST00000358528 A0A0G2JLW4 131 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 E7EWF7 191 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF213O14771 459 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 BMS1Q14692 1282 aaKnown RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 KARSQ15046 597 aaKnown RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 LRRFIP1Q32MZ4 808 aaKnown RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF790Q6PG37 636 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 FBXO38Q6PIJ6 1188 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 CNNM3Q8NE01 707 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 NSUN7Q8NE18 718 aaKnown RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 CABLES1Q8TDN4 633 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 BABAM1Q9NWV8 329 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 CDC42BPGQ6DT37 1551 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 KDRP35968 1356 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 VGLL3A8MV65 326 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 KIF2AO00139 706 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 UTP14CQ5TAP6 766 aaKnown RBP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 RASSF8Q8NHQ8 419 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 CARD6Q9BX69 1037 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 OVOS2A0A0J9YW53 1432 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 OVOS2Q6IE36 1432 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 KAT6BQ8WYB5 2073 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 ZBTB22O15209 634 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 IGKV5-2P06315 115 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 HOXB7P09629 217 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 SAFBQ15424 915 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSDE1-203ENST00000358528 CTNNA3Q9UI47 895 aa7.61□□□□□ -1.19
CSDE1-203ENST00000358528 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF202O95125 648 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 ATP5JP18859 108 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 FANCCQ00597 558 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 KMT5BQ4FZB7 885 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 KBTBD3Q8NAB2 608 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC150Q8NCX0 1101 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 ALG1Q9BT22 464 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 MYL10Q9BUA6 226 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 CNNM1Q9NRU3 951 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
CSDE1-203ENST00000358528 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 PHKBQ93100 1093 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 MRFAP1L1Q96HT8 127 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 METTL22Q9BUU2 404 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-203ENST00000358528 ANKRD26Q9UPS8 1709 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 CASQ1P31415 396 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 AKAP17AQ02040 695 aaKnown RBP7.6□□□□□ -1.19
CSDE1-203ENST00000358528 KCNG4Q8TDN1 519 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 RNF216Q9NWF9 866 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-203ENST00000358528 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
CSDE1-203ENST00000358528 DLC1Q96QB1 1528 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 A0A1B0GUL7 405 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 CBFA2T2O43439 604 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 PFKFB2O60825 505 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 ATP1A3P13637 1013 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 GPTP24298 496 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 GPS2Q13227 327 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 STOX1Q6ZVD7 989 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 ANKRD7Q92527 254 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 AIFM3Q96NN9 605 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 EPC1Q9H2F5 836 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 MTMR7Q9Y216 660 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 HSPD1P10809 573 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 PDIA3P30101 505 aaKnown RBP7.59□□□□□ -1.19
CSDE1-203ENST00000358528 METAP2P50579 478 aaKnown RBP eCLIP7.59□□□□□ -1.191e-12■□□□□ 10.3
CSDE1-203ENST00000358528 LRRC24Q50LG9 513 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 METTL24Q5JXM2 366 aa7.59□□□□□ -1.19
CSDE1-203ENST00000358528 SLC26A6Q9BXS9 759 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms