RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ZSCAN23Q3MJ62 389 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 BARGINQ6ZT62 677 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 WWC1Q8IX03 1113 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 PTPRCP08575 1304 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 GRXCR2A6NFK2 248 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 TULP1O00294 542 aaPredicted RBP4.84□□□□□ -1.63
CNGA1-201ENST00000358519 CAVIN1Q6NZI2 390 aaKnown RBP4.84□□□□□ -1.63
CNGA1-201ENST00000358519 NGDNQ8NEJ9 315 aaKnown RBP4.84□□□□□ -1.63
CNGA1-201ENST00000358519 SNX21Q969T3 373 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 NPDC1Q9NQX5 325 aaPredicted RBP4.84□□□□□ -1.63
CNGA1-201ENST00000358519 COG6Q9Y2V7 657 aa4.84□□□□□ -1.63
CNGA1-201ENST00000358519 CASZ1Q86V15 1759 aa4.84□□□□□ -1.64
CNGA1-201ENST00000358519 OSBPP22059 807 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 SSFA2P28290 1259 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 POLD1P28340 1107 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 TMPOP42166 694 aaKnown RBP4.83□□□□□ -1.64
CNGA1-201ENST00000358519 WAPLQ7Z5K2 1190 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 PMFBP1Q8TBY8 1022 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 PANK1Q8TE04 598 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 STRN4Q9NRL3 753 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 RGPD3A6NKT7 1758 aaPredicted RBP4.83□□□□□ -1.64
CNGA1-201ENST00000358519 RGPD4Q7Z3J3 1758 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 BAG4O95429 457 aaKnown RBP4.83□□□□□ -1.64
CNGA1-201ENST00000358519 CLEC17AQ6ZS10 378 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 AEBP1Q8IUX7 1158 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 HOMEZQ8IX15 550 aa4.83□□□□□ -1.64
CNGA1-201ENST00000358519 RBM46Q8TBY0 533 aaKnown RBP4.83□□□□□ -1.64
CNGA1-201ENST00000358519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
CNGA1-201ENST00000358519 BCL9O00512 1426 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 COL15A1P39059 1388 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 CEMIPQ8WUJ3 1361 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 SLC10A3P09131 477 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 TRIM32Q13049 653 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 SLC15A2Q16348 729 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 TCP11L2Q8N4U5 519 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 TIGD1Q96MW7 591 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 FEZ1Q99689 392 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 THRAP3Q9Y2W1 955 aaKnown RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 PCDHB15Q9Y5E8 787 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 SHANK3Q9BYB0 1731 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 CCDC66A2RUB6 948 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 PTMAP06454 111 aaKnown RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 CAPN2P17655 700 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 GABPB1Q06547 395 aaPredicted RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 NOLC1Q14978 699 aaKnown RBP eCLIP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 COL13A1Q5TAT6 717 aaPredicted RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 FAM160A2Q8N612 972 aaPredicted RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 API5Q9BZZ5 524 aaKnown RBP4.82□□□□□ -1.64
CNGA1-201ENST00000358519 OGFRQ9NZT2 677 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 CRB1P82279 1406 aa4.82□□□□□ -1.64
CNGA1-201ENST00000358519 TULP2O00295 520 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 CAPN5O15484 640 aaPredicted RBP4.81□□□□□ -1.64
CNGA1-201ENST00000358519 MCTP1Q6DN14 999 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 ANKRD7Q92527 254 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 THAP11Q96EK4 314 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 TRIM34Q9BYJ4 488 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 AK9Q5TCS8 1911 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 FMNL1O95466 1100 aaPredicted RBP4.81□□□□□ -1.64
CNGA1-201ENST00000358519 U2AF1L5P0DN76 240 aaPredicted RBP4.81□□□□□ -1.64
CNGA1-201ENST00000358519 HOXC9P31274 260 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 IRS1P35568 1242 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 U2AF1Q01081 240 aaKnown RBP eCLIP4.81□□□□□ -1.64
CNGA1-201ENST00000358519 PLEKHO1Q53GL0 409 aaPredicted RBP4.81□□□□□ -1.64
CNGA1-201ENST00000358519 ARHGEF25Q86VW2 580 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 PIBF1Q8WXW3 757 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 WWC3Q9ULE0 1092 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 DDX19BQ9UMR2 479 aa4.81□□□□□ -1.64
CNGA1-201ENST00000358519 RGPD5Q99666 1765 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 EPB41L2O43491 1005 aaKnown RBP4.8□□□□□ -1.64
CNGA1-201ENST00000358519 AKAP4Q5JQC9 854 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 ZBTB9Q96C00 473 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 RWDD1Q9H446 243 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-201ENST00000358519 LMBRD1Q9NUN5 540 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 BMP1P13497 986 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 MMP14P50281 582 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 FKBP5Q13451 457 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-201ENST00000358519 TERF2Q15554 542 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 TXNRD1Q16881 649 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 PUS10Q3MIT2 529 aaKnown RBP4.8□□□□□ -1.64
CNGA1-201ENST00000358519 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 MPNDQ8N594 471 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 RNF214Q8ND24 703 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 PDGFDQ9GZP0 370 aaPredicted RBP4.8□□□□□ -1.64
CNGA1-201ENST00000358519 MAP3K19Q56UN5 1328 aa4.8□□□□□ -1.64
CNGA1-201ENST00000358519 SYCE3A1L190 88 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 K7ELQ4 463 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 CHL1O00533 1208 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 EIF4A2Q14240 407 aaKnown RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 C17orf53Q8N3J3 647 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 ZNF526Q8TF50 670 aaPredicted RBP4.79□□□□□ -1.64
CNGA1-201ENST00000358519 CHMP4CQ96CF2 233 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 GGNBP2Q9H3C7 697 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 LAMB2P55268 1798 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 HEG1Q9ULI3 1381 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 C5P01031 1676 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 ANKRD36CQ5JPF3 1778 aa4.79□□□□□ -1.64
CNGA1-201ENST00000358519 APAF1O14727 1248 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms