RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 ADORA1P30542 326 aa26.64■■□□□ 1.86
POLR2J2-202ENST00000358438 HSPA4P34932 840 aa26.64■■□□□ 1.86
POLR2J2-202ENST00000358438 SETDB2Q96T68 719 aa26.64■■□□□ 1.86
POLR2J2-202ENST00000358438 SEC31BQ9NQW1 1179 aa26.64■■□□□ 1.86
POLR2J2-202ENST00000358438 SLC27A3Q5K4L6 730 aa26.64■■□□□ 1.85
POLR2J2-202ENST00000358438 CCDC158Q5M9N0 1113 aa26.64■■□□□ 1.85
POLR2J2-202ENST00000358438 TRAPPC3LQ5T215 181 aa26.64■■□□□ 1.85
POLR2J2-202ENST00000358438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.64■■□□□ 1.85
POLR2J2-202ENST00000358438 CASZ1Q86V15 1759 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 MROH5Q6ZUA9 1318 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 PHF14O94880 888 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 PDE8BO95263 885 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 DMTNQ08495 405 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 GORABQ5T7V8 394 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 IL17RAQ96F46 866 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 SNRKQ9NRH2 765 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 SPEF2Q9C093 1822 aa26.63■■□□□ 1.85
POLR2J2-202ENST00000358438 IFIT1P09914 478 aaKnown RBP26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 RFC4P35249 363 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 DDX46Q7L014 1031 aaKnown RBP26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 PAG1Q9NWQ8 432 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 A0A0D9SFI3 127 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 NCLP19338 710 aaKnown RBP26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 MPHOSPH8Q99549 860 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 NYXQ9GZU5 481 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 UBR3Q6ZT12 1888 aa26.62■■□□□ 1.85
POLR2J2-202ENST00000358438 KBTBD3Q8NAB2 608 aa26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 ABCC12Q96J65 1359 aa26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 GOLIM4O00461 696 aa26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 GTF2E1P29083 439 aaPredicted RBP26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 TTC39AQ5SRH9 613 aa26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 PRIMPOLQ96LW4 560 aa26.61■■□□□ 1.85
POLR2J2-202ENST00000358438 ST18O60284 1047 aa26.6■■□□□ 1.85
POLR2J2-202ENST00000358438 MBD3O95983 291 aa26.6■■□□□ 1.85
POLR2J2-202ENST00000358438 ADRA2BP18089 450 aa26.6■■□□□ 1.85
POLR2J2-202ENST00000358438 MYRIPQ8NFW9 859 aa26.6■■□□□ 1.85
POLR2J2-202ENST00000358438 MED23Q9ULK4 1368 aa26.6■■□□□ 1.85
POLR2J2-202ENST00000358438 SLC10A5Q5PT55 438 aa26.59■■□□□ 1.85
POLR2J2-202ENST00000358438 IGHMBP2P38935 993 aaKnown RBP26.59■■□□□ 1.85
POLR2J2-202ENST00000358438 PTH1RQ03431 593 aa26.59■■□□□ 1.85
POLR2J2-202ENST00000358438 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
POLR2J2-202ENST00000358438 NBPF5PQ86XG9 351 aaPredicted RBP26.59■■□□□ 1.85
POLR2J2-202ENST00000358438 CCDC171Q6TFL3 1326 aa26.58■■□□□ 1.85
POLR2J2-202ENST00000358438 HMGN5P82970 282 aaKnown RBP26.58■■□□□ 1.84
POLR2J2-202ENST00000358438 KIAA2012Q0VF49 1180 aa26.58■■□□□ 1.84
POLR2J2-202ENST00000358438 PUM3Q15397 648 aaKnown RBP26.58■■□□□ 1.84
POLR2J2-202ENST00000358438 C3orf67Q6ZVT6 689 aa26.58■■□□□ 1.84
POLR2J2-202ENST00000358438 TICAM2Q86XR7 235 aa26.58■■□□□ 1.84
POLR2J2-202ENST00000358438 ARAP2Q8WZ64 1704 aa26.57■■□□□ 1.84
POLR2J2-202ENST00000358438 GPT2Q8TD30 523 aa26.57■■□□□ 1.84
POLR2J2-202ENST00000358438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 TPTE2Q6XPS3 522 aa26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 HELBQ8NG08 1087 aaPredicted RBP26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 CDC5LQ99459 802 aaKnown RBP26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 COL4A1P02462 1669 aa26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 GTF2F1P35269 517 aaKnown RBP eCLIP26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 NEK4P51957 841 aa26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 LPIN2Q92539 896 aa26.56■■□□□ 1.84
POLR2J2-202ENST00000358438 FGFR2P21802 821 aa26.55■■□□□ 1.84
POLR2J2-202ENST00000358438 FKBP4Q02790 459 aaKnown RBP eCLIP26.55■■□□□ 1.84
POLR2J2-202ENST00000358438 GTPBP4Q9BZE4 634 aaKnown RBP26.55■■□□□ 1.84
POLR2J2-202ENST00000358438 ZNF589Q86UQ0 364 aaPredicted RBP26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 PRPF40AO75400 957 aaKnown RBP26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 SCARF1Q14162 830 aa26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 MAP4K1Q92918 833 aa26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 ZNF512BQ96KM6 892 aaPredicted RBP26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 SNX14Q9Y5W7 946 aa26.54■■□□□ 1.84
POLR2J2-202ENST00000358438 APBA3O96018 575 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 CHGBP05060 677 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 CARMIL3Q8ND23 1372 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 AKAP11Q9UKA4 1901 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 RASEFQ8IZ41 740 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 PROM2Q8N271 834 aa26.53■■□□□ 1.84
POLR2J2-202ENST00000358438 TAF1P21675 1872 aa26.52■■□□□ 1.84
POLR2J2-202ENST00000358438 TAF5LO75529 589 aa26.52■■□□□ 1.84
POLR2J2-202ENST00000358438 NLRP3Q96P20 1036 aa26.52■■□□□ 1.84
POLR2J2-202ENST00000358438 NECTIN1Q15223 517 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 MCMDC2Q4G0Z9 681 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 ANKRD18AQ8IVF6 992 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 RBM8AQ9Y5S9 174 aaKnown RBP26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 SLC5A1P13866 664 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 HMGB2P26583 209 aaKnown RBP26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 NFIXQ14938 502 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 TMEM63CQ9P1W3 806 aa26.51■■□□□ 1.83
POLR2J2-202ENST00000358438 ZSCAN20P17040 1043 aaPredicted RBP26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 MCAMP43121 646 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 CCDC102BQ68D86 513 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 PRPF40BQ6NWY9 871 aaKnown RBP26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 KCNB2Q92953 911 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 SEC62Q99442 399 aaKnown RBP26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 UPF3BQ9BZI7 483 aaKnown RBP26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 ZAP70P43403 619 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 KCNJ4P48050 445 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 CHRNDQ07001 517 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 ILDR2Q71H61 639 aa26.5■■□□□ 1.83
POLR2J2-202ENST00000358438 KIF20AO95235 890 aa26.49■■□□□ 1.83
POLR2J2-202ENST00000358438 PI16Q6UXB8 463 aa26.49■■□□□ 1.83
POLR2J2-202ENST00000358438 SYAP1Q96A49 352 aaPredicted RBP26.49■■□□□ 1.83
POLR2J2-202ENST00000358438 HELLSQ9NRZ9 838 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms